Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SE858_RS06545 Genome accession   NZ_CP138368
Coordinates   1269759..1270535 (-) Length   258 a.a.
NCBI ID   WP_000704972.1    Uniprot ID   P59210
Organism   Streptococcus agalactiae strain SagR92     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1264759..1275535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE858_RS06540 (SE858_06540) - 1269142..1269675 (-) 534 WP_001239184.1 DUF402 domain-containing protein -
  SE858_RS06545 (SE858_06545) recX 1269759..1270535 (-) 777 WP_000704972.1 recombination regulator RecX Regulator
  SE858_RS06550 (SE858_06550) rlmD 1270634..1271989 (+) 1356 WP_001103627.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  SE858_RS06555 (SE858_06555) - 1272258..1272828 (+) 571 Protein_1215 purine-nucleoside phosphorylase -
  SE858_RS06560 (SE858_06560) - 1272862..1273290 (+) 429 WP_000267395.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30713.66 Da        Isoelectric Point: 9.7805

>NTDB_id=825341 SE858_RS06545 WP_000704972.1 1269759..1270535(-) (recX) [Streptococcus agalactiae strain SagR92]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIINAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYL
QQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQNKLPLKALKDKLMQSLTTKGFDYQIVHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKHDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=825341 SE858_RS06545 WP_000704972.1 1269759..1270535(-) (recX) [Streptococcus agalactiae strain SagR92]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAATTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATACGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAAGTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTGATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGACCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAACTTTCAAGACTTAGCATCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAACAAACTTCCACTAAAAGCATTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGTGCATACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTATCAAAAAAACATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P59210

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

37.931

100

0.384