Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SE117_RS03425 Genome accession   NZ_CP138363
Coordinates   738326..739297 (+) Length   323 a.a.
NCBI ID   WP_000876318.1    Uniprot ID   A0A0H2XIG1
Organism   Staphylococcus aureus strain 15V8707     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 733326..744297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE117_RS03405 (SE117_03405) nrdI 734401..734799 (+) 399 WP_000692523.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  SE117_RS03410 (SE117_03410) nrdE 734762..736867 (+) 2106 WP_000855505.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  SE117_RS03415 (SE117_03415) nrdF 736985..737956 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  SE117_RS03420 (SE117_03420) - 738132..738251 (+) 120 WP_014532584.1 hypothetical protein -
  SE117_RS03425 (SE117_03425) ceuB 738326..739297 (+) 972 WP_000876318.1 ABC transporter permease Machinery gene
  SE117_RS03430 (SE117_03430) - 739284..740240 (+) 957 WP_001245577.1 iron chelate uptake ABC transporter family permease subunit -
  SE117_RS03435 (SE117_03435) - 740237..740998 (+) 762 WP_000616871.1 ABC transporter ATP-binding protein -
  SE117_RS03440 (SE117_03440) - 741117..742145 (+) 1029 WP_319098402.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  SE117_RS03445 (SE117_03445) - 742406..742720 (-) 315 WP_001127269.1 CHY zinc finger protein -
  SE117_RS03450 (SE117_03450) murB 742738..743661 (-) 924 WP_000608440.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35582.13 Da        Isoelectric Point: 10.1194

>NTDB_id=825092 SE117_RS03425 WP_000876318.1 738326..739297(+) (ceuB) [Staphylococcus aureus strain 15V8707]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=825092 SE117_RS03425 WP_000876318.1 738326..739297(+) (ceuB) [Staphylococcus aureus strain 15V8707]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGTAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTCTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAATTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATAGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XIG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471