Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SE117_RS02070 Genome accession   NZ_CP138363
Coordinates   460336..461139 (+) Length   267 a.a.
NCBI ID   WP_001134191.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 15V8707     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 455336..466139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE117_RS02050 (SE117_02050) - 456882..458219 (+) 1338 WP_000812844.1 aminotransferase class V-fold PLP-dependent enzyme -
  SE117_RS02055 (SE117_02055) tmk 458221..458838 (+) 618 WP_001272126.1 dTMP kinase -
  SE117_RS02060 (SE117_02060) - 458866..459195 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  SE117_RS02065 (SE117_02065) - 459409..460335 (+) 927 WP_000344322.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  SE117_RS02070 (SE117_02070) yaaT 460336..461139 (+) 804 WP_001134191.1 PSP1 domain-containing protein Regulator
  SE117_RS02075 (SE117_02075) yabA 461156..461503 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  SE117_RS02080 (SE117_02080) - 461777..462502 (+) 726 WP_000910687.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  SE117_RS02085 (SE117_02085) - 462495..462743 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  SE117_RS02090 (SE117_02090) rsmI 462745..463584 (+) 840 WP_000279928.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SE117_RS02095 (SE117_02095) metG 463869..465842 (+) 1974 WP_001051118.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30218.86 Da        Isoelectric Point: 4.5759

>NTDB_id=825085 SE117_RS02070 WP_001134191.1 460336..461139(+) (yaaT) [Staphylococcus aureus strain 15V8707]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=825085 SE117_RS02070 WP_001134191.1 460336..461139(+) (yaaT) [Staphylococcus aureus strain 15V8707]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGC
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACCTTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTGAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCGCAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618