Detailed information NTG0824987

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: SE087_RS13220
• Genome accession: NZ_CP138360
• Coordinates: 2637743..2639851 (+)
• Length: 702 a.a.
• NCBI ID: WP_319089783.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 17CS1042
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 2632743..2644851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE087_RS13195 (SE087_13195)	-	2632808..2633026 (+)	219	WP_000011686.1	sterile alpha motif-like domain-containing protein	-
SE087_RS13200 (SE087_13200)	-	2633416..2633847 (+)	432	WP_000455861.1	CHAP domain-containing protein	-
SE087_RS13205 (SE087_13205)	-	2633987..2635267 (-)	1281	WP_217175428.1	hydroxymethylglutaryl-CoA reductase, degradative	-
SE087_RS13210 (SE087_13210)	-	2635522..2636688 (+)	1167	WP_000151980.1	hydroxymethylglutaryl-CoA synthase	-
SE087_RS13215 (SE087_13215)	-	2636859..2637380 (-)	522	WP_000262599.1	methylated-DNA--[protein]-cysteine S-methyltransferase	-
SE087_RS13220 (SE087_13220)	clpE	2637743..2639851 (+)	2109	WP_319089783.1	ATP-dependent Clp protease ATP-binding subunit ClpL	Regulator
SE087_RS13225 (SE087_13225)	-	2639919..2640090 (-)	172	Protein_2567	FeoB-associated Cys-rich membrane protein	-
SE087_RS13230 (SE087_13230)	feoB	2640103..2642097 (-)	1995	WP_319089784.1	ferrous iron transport protein B	-
SE087_RS13235 (SE087_13235)	-	2642109..2642336 (-)	228	WP_000932073.1	FeoA family protein	-

Sequence

Protein

• Length: 702 a.a.
• Molecular weight: 77964.54 Da
• Isoelectric Point: 4.7095

>NTDB_id=824987 SE087_RS13220 WP_319089783.1 2637743..2639851(+) (clpE) [Staphylococcus aureus strain 17CS1042]
MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEVSPEELAQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNY
LEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISI
DISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDE
YRNNIMKDAALTRRFNEVLVNEPSARDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITA
AHLSAQSPAIDKVATEKRISELEHDKRKAVSAAEYKKADGIQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPV
SQIDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEA
LIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVI
NFKNTIIICTSNAGFGNGTDQEYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKESLQEIINLLLDDVQVTLDKKGITMNV
SQDAKDWLIEEGYDEELGACPLRRIVEQQVRDKITDYYLDHTDVKHVDLDIEDNELVVKGKS

Nucleotide

• Length: 2109 bp

>NTDB_id=824987 SE087_RS13220 WP_319089783.1 2637743..2639851(+) (clpE) [Staphylococcus aureus strain 17CS1042]
ATGAATAACAATTTTTTCAATAGTGACTTCGATTCTATTTTACGAAGAATGATGCAAGACATGCAAAACTCAAATCAGAC
TAGTAACAAGAAATACTATATTAATGGTAAAGAAGTTTCACCGGAAGAATTAGCACAATTTACACAACAAGGTGGTAATC
ATTCTGCCGAACAAAGTGCGCAAGCTTTTCAACAAGCAGCACTAAGACAACAAGGTCAACAAAGTGGCAATGGCAATTAT
CTAGAACAAATTGGTCGTAACTTAACGCAAGAGGCTCGTGACGGATTATTAGATCCAGTCATCGGTCGTGATAAAGAAAT
CCAAGAAACTGCAGAAGTCTTAAGTAGACGCACTAAAAACAATCCTATCCTAGTCGGAGAAGCTGGAGTTGGTAAAACTG
CGATTGTCGAAGGTTTAGCGCAAGCAATCGTTGAAGGGAACGTACCTGCAGCAATCAAAGATAAAGAAATTATATCTATA
GATATTTCATCGCTTGAAGCTGGAACGCAATATCGTGGCGCCTTTGAAGAAAACATCCAAAAGTTAGTTGAAGGCGTTAA
ATCATCACAAAATGCTGTGCTCTTCTTTGACGAAATTCACCAAATCATCGGTTCCGGCGCAACAGGAAGTGATTCCGGTA
GTAAAGGGTTATCTGATATTTTAAAACCAGCATTAAGTCGTGGTGAAATTTCAATTATAGGTGCAACAACTCAAGATGAA
TATCGCAATAATATCATGAAAGACGCTGCATTAACACGTCGTTTTAACGAGGTACTGGTTAACGAACCAAGCGCAAGAGA
TACGGTTGAAATTTTAAAAGGAATTCGCGAAAAATTTGAAACACACCATCAAGTCAAATTACCTGATGACGTATTAAAGG
CATGTGTAGACTTATCCATTCAATATATTCCACAACGCTTATTACCTGACAAAGCAATCGATGTATTAGATATTACAGCT
GCACATTTATCTGCACAAAGCCCTGCTATTGATAAAGTCGCGACTGAAAAACGTATTTCTGAATTGGAACATGATAAGCG
TAAAGCTGTAAGTGCTGCAGAATATAAAAAAGCAGATGGCATTCAAAATGAAATCAAATCTCTACAAGATAAATTAGAAA
ACAGTAATGGTGAACATACTGCAGTAGCAACTGTGCATGATATTTCTGATACCATTCAACGATTAACTGGTATTCCTGTA
TCTCAAATTGATGCCAATGACATTGAACGTTTAAAAAATATTTCTAGTCGTTTAAGAAGTAAAATCATTGGTCAAGATAA
AGCTGTAGAAATGGTTTCTCGTGCCATTCGTCGTAATCGAGCTGGTTTTGATGATGGCAATCGTCCAATTGGTAGCTTCC
TATTTGTCGGTCCTACTGGTGTTGGTAAAACAGAGCTTGCCAAACAGTTAGCCATTGATTTATTTGGTAATAAAGAGGCA
CTGATTCGACTTGATATGAGTGAATATAGTGATACTACTGCTGTTTCTAAAATGATTGGTACAACTGCTGGTTATGTCGG
TTATGACGATAATTCAAATACATTAACTGAAAAAGTACGACGCAATCCATATTCAGTCATTCTATTTGATGAAATTGAAA
AGGCTAATCCACAAATATTAACATTATTACTACAAGTGATGGATGATGGTAATTTAACAGATGGTCAAGGTAACGTCATC
AACTTTAAAAACACAATCATTATTTGTACGTCGAACGCTGGTTTTGGTAACGGTACAGACCAAGAATACGATGACATTAT
GCAAGAAATGAAAAAATTCTTCCGCCCTGAATTTCTTAACCGCTTCAATGGTATTGTGGAATTCTTACACCTAGATAAAG
AATCACTACAGGAAATCATTAATTTATTGTTGGATGATGTCCAAGTAACATTAGATAAAAAAGGTATTACGATGAATGTC
TCTCAAGATGCAAAAGATTGGTTAATTGAAGAGGGATATGATGAAGAGTTAGGCGCATGCCCATTAAGACGCATTGTTGA
ACAACAAGTGCGTGACAAAATAACAGATTATTATTTAGATCATACAGACGTTAAACATGTGGATTTAGATATCGAAGACA
ACGAATTAGTCGTCAAAGGTAAATCATGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (448-603)

• ATPase family associated with various cellular activities (AAA) (AAA) (123-257)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (611-682)

• AAA lid domain (AAA_lid_9) (265-362)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	47.434	91.595	0.434
clpE	Streptococcus pneumoniae Rx1	47.002	87.892	0.413
clpE	Streptococcus pneumoniae D39	47.002	87.892	0.413
clpE	Streptococcus pneumoniae R6	47.002	87.892	0.413
clpE	Streptococcus pneumoniae TIGR4	47.002	87.892	0.413
clpC	Lactococcus lactis subsp. cremoris KW2	45.886	90.028	0.413
clpC	Bacillus subtilis subsp. subtilis str. 168	44.037	93.162	0.41
clpC	Streptococcus thermophilus LMD-9	44.32	89.031	0.395
clpC	Streptococcus thermophilus LMG 18311	44.16	89.031	0.393
clpC	Streptococcus pneumoniae TIGR4	43.619	88.177	0.385
clpC	Streptococcus pneumoniae Rx1	43.619	88.177	0.385
clpC	Streptococcus pneumoniae D39	43.619	88.177	0.385
clpC	Streptococcus mutans UA159	43.74	87.607	0.383
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	41.894	88.746	0.372