Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SE087_RS09350 Genome accession   NZ_CP138360
Coordinates   1924451..1925191 (-) Length   246 a.a.
NCBI ID   WP_031877036.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 17CS1042     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1919451..1930191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE087_RS09325 (SE087_09325) hemH 1920328..1921251 (-) 924 WP_217176134.1 ferrochelatase -
  SE087_RS09330 (SE087_09330) hemE 1921309..1922346 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  SE087_RS09335 (SE087_09335) - 1922336..1922422 (-) 87 WP_031875110.1 hypothetical protein -
  SE087_RS09340 (SE087_09340) traP 1922608..1923111 (+) 504 WP_319080876.1 signal transduction protein TRAP -
  SE087_RS09345 (SE087_09345) ecsB 1923235..1924458 (-) 1224 WP_233682497.1 ABC transporter permease EcsB -
  SE087_RS09350 (SE087_09350) pptA 1924451..1925191 (-) 741 WP_031877036.1 ABC transporter ATP-binding protein EcsA Regulator
  SE087_RS09355 (SE087_09355) - 1925325..1925747 (+) 423 WP_000004981.1 HIT family protein -
  SE087_RS09360 (SE087_09360) - 1925888..1926253 (+) 366 WP_217176136.1 YtxH domain-containing protein -
  SE087_RS09365 (SE087_09365) - 1926986..1927543 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  SE087_RS09370 (SE087_09370) - 1927748..1928710 (+) 963 WP_000782119.1 foldase protein PrsA -
  SE087_RS09375 (SE087_09375) yhaM 1928831..1929772 (-) 942 WP_217176137.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27659.99 Da        Isoelectric Point: 4.6672

>NTDB_id=824971 SE087_RS09350 WP_031877036.1 1924451..1925191(-) (pptA) [Staphylococcus aureus strain 17CS1042]
MTVKVEQLTGGYGKRPVIKDINFELSKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=824971 SE087_RS09350 WP_031877036.1 1924451..1925191(-) (pptA) [Staphylococcus aureus strain 17CS1042]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAGCAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTCCATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545