Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SE087_RS03435 Genome accession   NZ_CP138360
Coordinates   711219..711893 (+) Length   224 a.a.
NCBI ID   WP_217175912.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 17CS1042     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 706219..716893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE087_RS03410 (SE087_03410) - 706437..707504 (+) 1068 WP_000980139.1 membrane protein -
  SE087_RS03415 (SE087_03415) - 707655..708698 (+) 1044 WP_319093307.1 alpha/beta hydrolase -
  SE087_RS03420 (SE087_03420) - 709026..709454 (+) 429 WP_000198502.1 hypothetical protein -
  SE087_RS03425 (SE087_03425) - 709661..710167 (-) 507 WP_115208598.1 GNAT family N-acetyltransferase -
  SE087_RS03430 (SE087_03430) graX 710280..711203 (+) 924 WP_000802957.1 auxiliary protein GraX/ApsX -
  SE087_RS03435 (SE087_03435) braR 711219..711893 (+) 675 WP_217175912.1 response regulator transcription factor Regulator
  SE087_RS03440 (SE087_03440) graS 711886..712926 (+) 1041 WP_217175913.1 sensor histidine kinase -
  SE087_RS03445 (SE087_03445) vraF 713070..713831 (+) 762 WP_319093316.1 ABC transporter ATP-binding protein VraF -
  SE087_RS03450 (SE087_03450) vraG 713821..715710 (+) 1890 WP_319093318.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26092.98 Da        Isoelectric Point: 4.3563

>NTDB_id=824914 SE087_RS03435 WP_217175912.1 711219..711893(+) (braR) [Staphylococcus aureus strain 17CS1042]
MQILLVEDDNTLFQELKKELEQWDFIVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=824914 SE087_RS03435 WP_217175912.1 711219..711893(+) (braR) [Staphylococcus aureus strain 17CS1042]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTATTGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397