Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SE087_RS02480 Genome accession   NZ_CP138360
Coordinates   515012..515815 (+) Length   267 a.a.
NCBI ID   WP_001134191.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 17CS1042     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 510012..520815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE087_RS02460 (SE087_02460) - 511558..512895 (+) 1338 WP_000812847.1 aminotransferase class V-fold PLP-dependent enzyme -
  SE087_RS02465 (SE087_02465) tmk 512897..513514 (+) 618 WP_001272126.1 dTMP kinase -
  SE087_RS02470 (SE087_02470) - 513542..513871 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  SE087_RS02475 (SE087_02475) - 514085..515011 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  SE087_RS02480 (SE087_02480) yaaT 515012..515815 (+) 804 WP_001134191.1 PSP1 domain-containing protein Regulator
  SE087_RS02485 (SE087_02485) yabA 515832..516179 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  SE087_RS02490 (SE087_02490) - 516453..517178 (+) 726 WP_319091504.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  SE087_RS02495 (SE087_02495) - 517171..517419 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  SE087_RS02500 (SE087_02500) rsmI 517421..518260 (+) 840 WP_217176183.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SE087_RS02505 (SE087_02505) metG 518545..520518 (+) 1974 WP_001051123.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30218.86 Da        Isoelectric Point: 4.5759

>NTDB_id=824909 SE087_RS02480 WP_001134191.1 515012..515815(+) (yaaT) [Staphylococcus aureus strain 17CS1042]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=824909 SE087_RS02480 WP_001134191.1 515012..515815(+) (yaaT) [Staphylococcus aureus strain 17CS1042]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGCTCTACATTTTTAGGAGATTTTGAACCAGTATCAATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCGCAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618