Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | R8625_RS08375 | Genome accession | NZ_AP026923 |
| Coordinates | 1644584..1645543 (+) | Length | 319 a.a. |
| NCBI ID | WP_000777246.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700054 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1639584..1650543
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8625_RS08345 (PC0054_16610) | - | 1639784..1640548 (-) | 765 | WP_050211275.1 | nuclear transport factor 2 family protein | - |
| R8625_RS08350 (PC0054_16620) | - | 1640552..1640995 (-) | 444 | WP_317649123.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| R8625_RS08355 (PC0054_16630) | - | 1641677..1641973 (-) | 297 | WP_000230149.1 | bacteriocin immunity protein | - |
| R8625_RS08360 (PC0054_16640) | pepA | 1641995..1643059 (-) | 1065 | WP_000209199.1 | glutamyl aminopeptidase | - |
| R8625_RS08365 (PC0054_16650) | galE | 1643459..1644160 (+) | 702 | WP_000167830.1 | UDP-glucose 4-epimerase GalE | - |
| R8625_RS08370 | - | 1644176..1644286 (+) | 111 | WP_001108391.1 | hypothetical protein | - |
| R8625_RS08375 (PC0054_16660) | ceuB | 1644584..1645543 (+) | 960 | WP_000777246.1 | ABC transporter permease | Machinery gene |
| R8625_RS08380 (PC0054_16670) | - | 1645533..1646489 (+) | 957 | WP_001193667.1 | iron chelate uptake ABC transporter family permease subunit | - |
| R8625_RS08385 (PC0054_16680) | - | 1646486..1647238 (+) | 753 | WP_000764306.1 | ABC transporter ATP-binding protein | - |
| R8625_RS08390 (PC0054_16690) | - | 1647334..1648299 (+) | 966 | WP_000858250.1 | siderophore ABC transporter substrate-binding protein | - |
| R8625_RS08395 (PC0054_16700) | yidD | 1648524..1648766 (-) | 243 | WP_000821616.1 | membrane protein insertion efficiency factor YidD | - |
| R8625_RS08400 (PC0054_16710) | - | 1648766..1649488 (-) | 723 | WP_001222228.1 | pseudouridine synthase | - |
| R8625_RS08405 (PC0054_16720) | scpB | 1649475..1650044 (-) | 570 | WP_000105310.1 | SMC-Scp complex subunit ScpB | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 35365.25 Da Isoelectric Point: 9.2975
>NTDB_id=82457 R8625_RS08375 WP_000777246.1 1644584..1645543(+) (ceuB) [Streptococcus pneumoniae strain PZ900700054]
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKCYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKCYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
Nucleotide
Download Length: 960 bp
>NTDB_id=82457 R8625_RS08375 WP_000777246.1 1644584..1645543(+) (ceuB) [Streptococcus pneumoniae strain PZ900700054]
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGTGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGTGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
37.419 |
97.179 |
0.364 |