Detailed information NTG0824364

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: R3F78_RS04430
• Genome accession: NZ_CP138301
• Coordinates: 499034..500020 (-)
• Length: 328 a.a.
• NCBI ID: WP_039154871.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain CNPSo 29
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 494034..505020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3F78_RS04415 (R3F78_04415)	-	494415..496031 (+)	1617	WP_039154876.1	acyl-CoA carboxylase subunit beta	-
R3F78_RS04420 (R3F78_04420)	-	496028..498001 (+)	1974	WP_039154873.1	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	-
R3F78_RS04425 (R3F78_04425)	-	498250..499062 (+)	813	WP_039158154.1	hypothetical protein	-
R3F78_RS04430 (R3F78_04430)	amiE	499034..500020 (-)	987	WP_039154871.1	ABC transporter ATP-binding protein	Regulator
R3F78_RS04435 (R3F78_04435)	-	500017..501024 (-)	1008	WP_014491188.1	ABC transporter ATP-binding protein	-
R3F78_RS04440 (R3F78_04440)	-	501024..501917 (-)	894	WP_232674309.1	ABC transporter permease	-
R3F78_RS04445 (R3F78_04445)	-	502108..503055 (-)	948	WP_014491190.1	ABC transporter permease	-
R3F78_RS04450 (R3F78_04450)	-	503091..504689 (-)	1599	WP_039158151.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 35798.27 Da
• Isoelectric Point: 9.0682

>NTDB_id=824364 R3F78_RS04430 WP_039154871.1 499034..500020(-) (amiE) [Bradyrhizobium japonicum strain CNPSo 29]
MTEALLEVTDLKKHYAVRAGVLRRQVGTVHAVDGVSFSVHTGETLGLVGESGCGKSTVARSVLRLVEPTSGQIRLDGEDI
TRLSKTALRPHRRSMQIVFQDPFASLNPRMTAGDIVGEPLAVHGLASGKELEARTAKLFEQVGLRPDQMRNFPHQFSGGQ
RQRICIARALALGPRLIVCDEPVSALDVSIQAQVINLLIDLQKQHGFSYLFIAHDLAVVAHISHRVAVMYLGRIVEIADK
DELFRNPRHPYTQALLASVPVANPFAKKLAPLVDGDVPSPVNPPSGCAFHTRCRFAIERCKTERPALVNAGDRHQVACLL
NEGTGRSQ

Nucleotide

• Length: 987 bp

>NTDB_id=824364 R3F78_RS04430 WP_039154871.1 499034..500020(-) (amiE) [Bradyrhizobium japonicum strain CNPSo 29]
ATGACCGAGGCGCTGCTCGAAGTCACCGATCTCAAGAAGCACTATGCGGTGCGCGCCGGCGTGTTGCGGCGGCAGGTCGG
CACCGTGCATGCGGTCGACGGCGTCTCGTTCTCGGTTCATACCGGCGAGACGCTCGGCCTCGTCGGCGAATCCGGCTGCG
GCAAGTCGACGGTGGCGCGCAGCGTGCTGCGGCTGGTCGAGCCGACTTCGGGCCAGATCCGCCTTGATGGAGAGGACATC
ACCCGTCTCTCCAAGACCGCGCTGCGTCCGCATCGCCGCTCAATGCAGATCGTGTTCCAGGACCCGTTCGCTTCGCTCAA
TCCGCGCATGACCGCCGGCGATATTGTCGGTGAACCCCTCGCCGTGCATGGGCTCGCAAGCGGTAAGGAGCTGGAAGCGC
GTACCGCAAAACTGTTCGAGCAGGTGGGCCTGCGGCCCGATCAGATGCGCAACTTCCCGCACCAATTTTCCGGCGGCCAG
CGCCAGCGCATCTGCATCGCGCGGGCGCTGGCGCTGGGTCCACGACTGATCGTCTGCGACGAGCCGGTCTCCGCGCTCGA
CGTCTCGATCCAGGCGCAGGTGATCAATCTCCTGATCGACCTGCAAAAGCAGCACGGCTTCTCCTATCTCTTCATCGCGC
ACGACCTCGCCGTGGTCGCCCATATCAGCCACCGCGTCGCCGTGATGTATCTCGGCCGCATCGTCGAGATCGCCGACAAG
GACGAGCTGTTCCGCAATCCGCGCCATCCCTACACGCAGGCCCTGCTCGCGTCAGTGCCGGTTGCAAACCCGTTTGCCAA
GAAGCTCGCGCCGCTGGTCGACGGCGACGTGCCGAGCCCGGTCAATCCGCCATCTGGCTGCGCGTTTCACACCCGCTGCC
GGTTTGCGATCGAGCGGTGCAAAACGGAGCGGCCGGCGCTGGTGAACGCTGGTGATAGGCATCAGGTGGCGTGTCTGCTC
AACGAGGGGACGGGACGGAGCCAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (33-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	39.64	100	0.402
amiE	Streptococcus thermophilus LMD-9	39.339	100	0.399
amiE	Streptococcus thermophilus LMG 18311	39.339	100	0.399
oppD	Streptococcus mutans UA159	39.815	98.78	0.393
amiF	Streptococcus salivarius strain HSISS4	45.588	82.927	0.378
amiF	Streptococcus thermophilus LMG 18311	45.185	82.317	0.372
amiF	Streptococcus thermophilus LMD-9	45.185	82.317	0.372