Detailed information NTG0824183

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: SC131_RS18355
• Genome accession: NZ_CP138217
• Coordinates: 3766022..3767005 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain 20Y000092
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3761022..3772005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SC131_RS18335 (SC131_18310)	dppA	3762166..3763773 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
SC131_RS18340 (SC131_18315)	-	3763835..3764062 (-)	228	WP_000198576.1	hypothetical protein	-
SC131_RS18345 (SC131_18320)	dppB	3764080..3765099 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
SC131_RS18350 (SC131_18325)	dppC	3765109..3766011 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
SC131_RS18355 (SC131_18330)	amiE	3766022..3767005 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
SC131_RS18360 (SC131_18335)	dppF	3767002..3768006 (+)	1005	WP_000103570.1	dipeptide ABC transporter ATP-binding subunit DppF	-
SC131_RS18365 (SC131_18340)	yhjV	3768036..3769307 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
SC131_RS18370 (SC131_18345)	ldrD	3769783..3769890 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SC131_RS18375 (SC131_18350)	bcsG	3769976..3771655 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
SC131_RS18380 (SC131_18355)	bcsF	3771652..3771843 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=824183 SC131_RS18355 WP_001196477.1 3766022..3767005(+) (amiE) [Escherichia coli strain 20Y000092]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=824183 SC131_RS18355 WP_001196477.1 3766022..3767005(+) (amiE) [Escherichia coli strain 20Y000092]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404