Detailed information NTG0824102

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: HK937_RS06015
• Genome accession: NZ_CP137883
• Coordinates: 1165327..1166277 (+)
• Length: 316 a.a.
• NCBI ID: WP_041160151.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain P4549
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1160327..1171277

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HK937_RS06000 (HK937_0006000)	-	1161175..1163106 (-)	1932	WP_052785346.1	hypothetical protein	-
HK937_RS06005 (HK937_0006005)	-	1163529..1164455 (+)	927	WP_224385684.1	DUF2972 domain-containing protein	-
HK937_RS06010 (HK937_0006010)	-	1164419..1165268 (-)	850	Protein_1165	glycosyltransferase family 2 protein	-
HK937_RS06015 (HK937_0006015)	waaF	1165327..1166277 (+)	951	WP_041160151.1	lipopolysaccharide heptosyltransferase II	Regulator
HK937_RS06020 (HK937_0006020)	-	1166263..1167027 (-)	765	WP_002899462.1	glycosyltransferase family 25 protein	-
HK937_RS06025 (HK937_0006025)	gmhA	1167027..1167587 (-)	561	WP_041160152.1	D-sedoheptulose 7-phosphate isomerase	-
HK937_RS06030 (HK937_0006030)	rfaE1	1167584..1168969 (-)	1386	WP_002868598.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
HK937_RS06035 (HK937_0006035)	rfaD	1168962..1169915 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
HK937_RS06040 (HK937_0006040)	gmhB	1169916..1170477 (-)	562	Protein_1171	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
HK937_RS06045 (HK937_0006045)	-	1170558..1170860 (+)	303	WP_002852762.1	c-type cytochrome	-
HK937_RS06050 (HK937_0006050)	ccoS	1170883..1171089 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36292.91 Da
• Isoelectric Point: 10.2419

>NTDB_id=824102 HK937_RS06015 WP_041160151.1 1165327..1166277(+) (waaF) [Campylobacter jejuni subsp. jejuni strain P4549]
MKIFIHLPTWLGDAVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKIKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=824102 HK937_RS06015 WP_041160151.1 1165327..1166277(+) (waaF) [Campylobacter jejuni subsp. jejuni strain P4549]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGTTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCATATAAGTGCGGTCTATAAGATAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAACGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.541	99.367	0.949