Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R8625_RS02690 Genome accession   NZ_AP026923
Coordinates   524726..524992 (+) Length   88 a.a.
NCBI ID   WP_001820593.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700054     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 519726..529992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8625_RS02670 (PC0054_05270) - 519938..520447 (+) 510 WP_000619941.1 N-acetyltransferase -
  R8625_RS02675 (PC0054_05280) pheT 520524..522929 (+) 2406 WP_317649305.1 phenylalanine--tRNA ligase subunit beta -
  R8625_RS02680 (PC0054_05290) - 522997..523998 (-) 1002 WP_000597975.1 endonuclease/exonuclease/phosphatase family protein -
  R8625_RS02685 (PC0054_05300) - 524154..524642 (+) 489 Protein_530 transposase -
  R8625_RS02690 (PC0054_05310) HI0659 524726..524992 (+) 267 WP_001820593.1 helix-turn-helix domain-containing protein Machinery gene
  R8625_RS02695 (PC0054_05320) metE 525253..527502 (+) 2250 WP_317649306.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R8625_RS02700 (PC0054_05330) metF 527566..528432 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9670.12 Da        Isoelectric Point: 4.3934

>NTDB_id=82407 R8625_RS02690 WP_001820593.1 524726..524992(+) (HI0659) [Streptococcus pneumoniae strain PZ900700054]
MEGCPSELFSKEEILESDMRVAIMSELIEARHEQGINQRKLEELSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=82407 R8625_RS02690 WP_001820593.1 524726..524992(+) (HI0659) [Streptococcus pneumoniae strain PZ900700054]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATTATGAGCGAGTT
GATTGAAGCTAGACATGAACAAGGAATCAATCAGAGAAAGCTAGAAGAACTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

55.844

87.5

0.489