Detailed information NTG0824003

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: SA976_RS01475
• Genome accession: NZ_CP137765
• Coordinates: 307275..308258 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain GCEC19
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 302275..313258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SA976_RS01460 (SA976_01460)	dppA	303575..305182 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
SA976_RS01465 (SA976_01465)	dppB	305333..306352 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
SA976_RS01470 (SA976_01470)	dppC	306362..307264 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
SA976_RS01475 (SA976_01475)	amiE	307275..308258 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
SA976_RS01480 (SA976_01480)	dppF	308255..309259 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
SA976_RS01485 (SA976_01485)	yhjV	309289..310560 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
SA976_RS01490 (SA976_01490)	-	311036..311143 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SA976_RS01495 (SA976_01495)	-	311519..311626 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SA976_RS01500 (SA976_01500)	-	312002..312109 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SA976_RS01505 (SA976_01505)	-	312485..312592 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=824003 SA976_RS01475 WP_001196496.1 307275..308258(+) (amiE) [Escherichia coli strain GCEC19]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=824003 SA976_RS01475 WP_001196496.1 307275..308258(+) (amiE) [Escherichia coli strain GCEC19]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401