Detailed information NTG0823840

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: R6I16_RS01370
• Genome accession: NZ_CP137718
• Coordinates: 279229..280212 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli isolate FELIX_MS772
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 274229..285212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6I16_RS01345 (R6I16_01345)	bcsF	274390..274581 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
R6I16_RS01350 (R6I16_01350)	bcsG	274578..276257 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
R6I16_RS01355 (R6I16_01355)	ldrD	276344..276451 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
R6I16_RS01360 (R6I16_01360)	yhjV	276927..278198 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
R6I16_RS01365 (R6I16_01365)	dppF	278228..279232 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
R6I16_RS01370 (R6I16_01370)	amiE	279229..280212 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
R6I16_RS01375 (R6I16_01375)	dppC	280223..281125 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
R6I16_RS01380 (R6I16_01380)	dppB	281135..282154 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
R6I16_RS01390 (R6I16_01390)	dppA	282462..284069 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=823840 R6I16_RS01370 WP_001196486.1 279229..280212(-) (amiE) [Escherichia coli isolate FELIX_MS772]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=823840 R6I16_RS01370 WP_001196486.1 279229..280212(-) (amiE) [Escherichia coli isolate FELIX_MS772]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404