Detailed information NTG0823760

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QHF92_RS19575
• Genome accession: NZ_CP123994
• Coordinates: 3852517..3853662 (+)
• Length: 381 a.a.
• NCBI ID: WP_003235896.1
• Uniprot ID: A0A9W5LLN8
• Organism: Bacillus inaquosorum strain M3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3847517..3858662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QHF92_RS19555 (QHF92_19555)	-	3847525..3848805 (+)	1281	WP_060399737.1	pitrilysin family protein	-
QHF92_RS19560 (QHF92_19560)	-	3848802..3849503 (+)	702	WP_060399738.1	hypothetical protein	-
QHF92_RS19565 (QHF92_19565)	-	3849510..3850886 (-)	1377	WP_060399739.1	YncE family protein	-
QHF92_RS19570 (QHF92_19570)	-	3850926..3852287 (-)	1362	WP_060399740.1	YncE family protein	-
QHF92_RS19575 (QHF92_19575)	rapF	3852517..3853662 (+)	1146	WP_003235896.1	response regulator aspartate phosphatase RapF	Regulator
QHF92_RS19580 (QHF92_19580)	phrF	3853646..3853765 (+)	120	WP_003222023.1	phosphatase RapF inhibitor PhrF	Regulator
QHF92_RS19585 (QHF92_19585)	-	3853864..3854326 (+)	463	Protein_3804	YbaK/EbsC family protein	-
QHF92_RS19590 (QHF92_19590)	speB	3854359..3855231 (-)	873	WP_060399742.1	agmatinase	-
QHF92_RS19595 (QHF92_19595)	speE	3855292..3856122 (-)	831	WP_003235914.1	spermidine synthase	-
QHF92_RS19600 (QHF92_19600)	-	3856324..3858399 (+)	2076	WP_060399743.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.00 Da
• Isoelectric Point: 5.1475

>NTDB_id=823760 QHF92_RS19575 WP_003235896.1 3852517..3853662(+) (rapF) [Bacillus inaquosorum strain M3]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNIIPSLPQAYFLITQIHYKMGKMDKAHAYHSKGMAYSQKAGDSIYLSEFEFLKSLYLSGPDEEAI
QSFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=823760 QHF92_RS19575 WP_003235896.1 3852517..3853662(+) (rapF) [Bacillus inaquosorum strain M3]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
TGATGCAGAATATTTGCGAAGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCGCTAGAAAAAATGCGGATCGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTCG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAAATGTCTGAGTCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTTCAGTGTCACTCTTT
ATTTGCTACCAATTTCTTAGATCTGAAACAATATGAGGATGCCATATCACATTTTAAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGAAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCTAATATTATACCTTCCCTGCCCCAAGCCTATTTTTT
AATTACACAAATTCATTATAAAATGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTCAATATATTTATCGGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGTTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCCTAAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	95.801	100	0.958
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572