Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QHF92_RS16500 Genome accession   NZ_CP123994
Coordinates   3233312..3235609 (-) Length   765 a.a.
NCBI ID   WP_060399389.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain M3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3228312..3240609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHF92_RS16460 (QHF92_16460) - 3228779..3229210 (+) 432 WP_003241054.1 Na(+)/H(+) antiporter subunit B -
  QHF92_RS16465 (QHF92_16465) - 3229210..3229551 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  QHF92_RS16470 (QHF92_16470) - 3229544..3231025 (+) 1482 WP_060399386.1 Na+/H+ antiporter subunit D -
  QHF92_RS16475 (QHF92_16475) - 3231031..3231507 (+) 477 WP_060399387.1 Na+/H+ antiporter subunit E -
  QHF92_RS16480 (QHF92_16480) - 3231507..3231791 (+) 285 WP_003241049.1 Na(+)/H(+) antiporter subunit F1 -
  QHF92_RS16485 (QHF92_16485) mnhG 3231775..3232149 (+) 375 WP_060399388.1 monovalent cation/H(+) antiporter subunit G -
  QHF92_RS16490 (QHF92_16490) - 3232188..3232568 (-) 381 WP_019259331.1 hotdog fold thioesterase -
  QHF92_RS16495 (QHF92_16495) comA 3232587..3233231 (-) 645 WP_104010190.1 two-component system response regulator ComA Regulator
  QHF92_RS16500 (QHF92_16500) comP 3233312..3235609 (-) 2298 WP_060399389.1 histidine kinase Regulator
  QHF92_RS16505 (QHF92_16505) comX 3235617..3235778 (-) 162 WP_003241045.1 competence pheromone ComX -
  QHF92_RS16510 (QHF92_16510) - 3235793..3236653 (-) 861 WP_032732270.1 polyprenyl synthetase family protein -
  QHF92_RS16515 (QHF92_16515) degQ 3236838..3236978 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QHF92_RS16520 (QHF92_16520) - 3237158..3237325 (+) 168 WP_119914210.1 hypothetical protein -
  QHF92_RS16525 (QHF92_16525) - 3237438..3237806 (+) 369 WP_003241042.1 hypothetical protein -
  QHF92_RS16530 (QHF92_16530) pdeH 3237782..3239011 (-) 1230 WP_060399390.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88490.97 Da        Isoelectric Point: 7.9024

>NTDB_id=823749 QHF92_RS16500 WP_060399389.1 3233312..3235609(-) (comP) [Bacillus inaquosorum strain M3]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKSINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFILKINESKDLLSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVVIYFCIILIKNKDTEQAHIIKVLTVINIFSFAPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPESDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQLIRDSTFLTQVFEELKNTILEVSLVSRAYVYEVSADGSIKLYDDETVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDNPCREDVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDNGVGFD
QDKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=823749 QHF92_RS16500 WP_060399389.1 3233312..3235609(-) (comP) [Bacillus inaquosorum strain M3]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGGGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGCGGAATAGAAAAAGGGGATATCGTAAAGAGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTAAGTTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACCTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATATTAA
AAATAAATGAATCGAAGGATTTACTATCTGCTTTAGTTTTAATTATATTTTTGTTATCTGCTTCTATTGCTTATATAAGC
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTAGTACCGA
TCATAAATGTAGTGTGTGAAATGTTTCGTTCACATCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCTTTT
TTCTTTTTATTTATCATAGTAGTGATTTATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTCCTCACTGTTATTAATATCTTTTCTTTTGCACCTTTTTTGTGTTTATATTTGATACCTTATGTGTTTCTAAATG
CGCACTATGTTTCTTCCTTTTTAGCAGCTTCATTTATGATGTTAATACCTTTCTCCTTGGTATTTCAATTTATGACAAAT
AAAATCTATAATGTGGATTTTATTTTAAGCAGATTAAGATATTATGGCTTTTTAGCTTTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGAGAGTGATTTTTATAGTGTTAAACTAACATTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGGTTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAT
AGTATATATAAATTTACGCAGCTGATTAGAGACTCAACATTCCTGACTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTCTCTCTAGTTAGCCGAGCATATGTATATGAAGTTTCAGCAGACGGAAGTATTAAGCTATATGATGATGAGACCG
TAAATTCATTCGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGAAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAGATAGGTGAACGCGGCGGTAAATCATTTGTGATTCTTTGTTTATCTAAAATGAATACGCCCCGTCT
CACACTTGAAGAACTTTCTTGGCTGAAAACCTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTGAAG
AGCTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAATCCAGTGTGGCTTAAGAAACTCATGTACACGATTGAA
GAAAAACAACGTTCTGATCTTGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCTTTAAAACGACAGTGTGA
GCTGTTTTTGGCTGATTTTAAGAAGGATGATAATCCATGCCGGGAAGATGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTG
AAGGCGCTGTCGAAGCTTGTGGCGCAGCAGCAGGAGCGGGTGCCGTTTCATATCCGTTTAAATACGGGCAGATTTACGGC
TTCGCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACAATGGCGTAGGGTTTGAT
CAAGATAAAAATAATGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGACGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.938

100

0.595