Detailed information NTG0823740

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QHF92_RS13930
• Genome accession: NZ_CP123994
• Coordinates: 2748810..2751206 (-)
• Length: 798 a.a.
• NCBI ID: WP_003237483.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain M3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2743810..2756206

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QHF92_RS13895 (QHF92_13895)	-	2744882..2745610 (+)	729	WP_060399132.1	amino acid ABC transporter ATP-binding protein	-
QHF92_RS13900 (QHF92_13900)	glnH	2745632..2746453 (+)	822	WP_003237479.1	glutamine ABC transporter substrate-binding protein GlnH	-
QHF92_RS13905 (QHF92_13905)	-	2746514..2747164 (+)	651	WP_003237480.1	amino acid ABC transporter permease	-
QHF92_RS13910 (QHF92_13910)	-	2747181..2747837 (+)	657	WP_003237481.1	amino acid ABC transporter permease	-
QHF92_RS13915 (QHF92_13915)	-	2747873..2748004 (-)	132	WP_003225895.1	YrzQ family protein	-
QHF92_RS13920 (QHF92_13920)	-	2748026..2748217 (-)	192	WP_003225893.1	hypothetical protein	-
QHF92_RS13925 (QHF92_13925)	-	2748229..2748753 (-)	525	WP_080429038.1	PRC-barrel domain-containing protein	-
QHF92_RS13930 (QHF92_13930)	recD2	2748810..2751206 (-)	2397	WP_003237483.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QHF92_RS13935 (QHF92_13935)	-	2751231..2751851 (-)	621	WP_232919234.1	tetratricopeptide repeat protein	-
QHF92_RS13940 (QHF92_13940)	mnmA	2751937..2753052 (-)	1116	WP_060399134.1	tRNA 2-thiouridine(34) synthase MnmA	-
QHF92_RS13945 (QHF92_13945)	-	2753080..2754222 (-)	1143	WP_003237487.1	cysteine desulfurase family protein	-
QHF92_RS13950 (QHF92_13950)	cymR	2754241..2754657 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QHF92_RS13955 (QHF92_13955)	-	2754859..2756124 (+)	1266	WP_060399135.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89155.77 Da
• Isoelectric Point: 5.0321

>NTDB_id=823740 QHF92_RS13930 WP_003237483.1 2748810..2751206(-) (recD2) [Bacillus inaquosorum strain M3]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEKLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPVVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDEPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPREKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSLQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=823740 QHF92_RS13930 WP_003237483.1 2748810..2751206(-) (recD2) [Bacillus inaquosorum strain M3]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCGACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTGTT
CGAGGGAATCGGCAAAAAAACAGCCGAGGAAATTGTGAAAAAGCTGGGCGACAGCGCTATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGACGTTCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCCGGCGCCTTGCAGCGTCATCAGGGA
CTGGAGCAAATCATGATTTCCCTGAATCAGTTTGGCTTCGGCCCGCAGCTGTCTATGAAAATCTACCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAACCCTTATCAGCTTGTGAAAGATGTAGAAGGCATCGGATTTGGGAAAGCGGATG
AGCTGGGCAGCAGAATGGGCCTTTCGGGTAATCACCCTGAGCGGGTAAAAGCCGCCATATTGTACACGCTTGAAACGACT
TGTCTGTCAGAAGGGCATACGTACATAGAAACGGAGAAGCTGATTATTGACACCCAATCTCTGTTAAATCAATCAGCTCG
GGAGGGACAGCGCATCACTGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCTGAACAAAATGTTGCTAAGCGAGTGAAACATATCGCAAGCCAAACT
GAATATGATGACCAGTTTCCCGAATCAGAATTTCTGCTCGCTTTAGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCTAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCACCGATGCTTCTTTTAACGGGGGGACCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAACTGTACGGAGAGCTTCACGGTGTGTCACTCGACCCGTCAGCGTATAAAAAGGAT
GAAGCTTTTCCGGTTGTATTGGCCGCACCGACAGGAAGAGCGGCGAAACGGATGAGTGAATCAACGGGGCTTCCGGCAGT
GACGATTCACAGGCTGCTTGGCTGGAACGGCGCTGAAGGATTTACCCATACAGAGGATGAGCCGATTGAAGGGAAGCTGT
TAATAATCGATGAAGCCAGCATGCTTGATATATGGCTGGCGAACCATTTGTTCAAGGCGATCCCTGATCATATTCAAATC
ATCATTGTCGGTGACGAAGATCAGCTGCCTTCTGTCGGTCCGGGCCAAGTGCTGAGAGACCTTTTGGCATCCCAGGTGAT
ACCGACTGTGAGACTGACAGACATCTACCGCCAGGCGGAGGGTTCATCGATTGTCGAGCTTGCCCACCAAATGAAAAATG
GGTTGCTGCCAAACAATTTGACTGCCCCGACGAAGGACCGTTCCTTTATTCGCTGCGGAGGCTCGCAAATTAAAGAGGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACGGCAAAGGACATTCAGGTTCTCGCCCCGATGTACAGAGG
AAAAGCCGGGATCAATGAACTGAATGTGATGCTACAGGATATTTTGAATCCTCCTAGAGAAAAACGGAGGGAAATAAAGT
TCGGGGATGTTGTCTACAGAACCGGGGATAAAATTTTGCAGCTCGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAC
ATTGGCGAAATTACATCGATATTTTATGCGAAGGAAAATACAGAAAAAGAAGATATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACGTTTACGAAAAAAGATTTTAACCAGTTTACCCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCTATTACA
AGAGCAAAGAAATTTCTCATTTTATGCGGAGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAACGACGCAACTGTCAG
ACAGACTTCTTTGAAAAACAGGCTGTCATTACAGGTTGAGGAAATGGATGCTGAGCTTGAAGCTTTGCAAAAGGAGCTCC
CATTCAGCGTACACGATGCCAATATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	98.745	99.875	0.986