Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QHF92_RS01995 Genome accession   NZ_CP123994
Coordinates   385058..385198 (+) Length   46 a.a.
NCBI ID   WP_225516634.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain M3     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 380058..390198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHF92_RS01990 (QHF92_01990) srfAB 381922..385014 (+) 3093 Protein_351 surfactin non-ribosomal peptide synthetase SrfAB -
  QHF92_RS01995 (QHF92_01995) comS 385058..385198 (+) 141 WP_225516634.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5274.07 Da        Isoelectric Point: 9.2422

>NTDB_id=823694 QHF92_RS01995 WP_225516634.1 385058..385198(+) (comS) [Bacillus inaquosorum strain M3]
MNRSSKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=823694 QHF92_RS01995 WP_225516634.1 385058..385198(+) (comS) [Bacillus inaquosorum strain M3]
TTGAACCGATCAAGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978