Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QHG62_RS24725 Genome accession   NZ_CP123990
Coordinates   5165442..5165840 (+) Length   132 a.a.
NCBI ID   WP_126749384.1    Uniprot ID   A0A3R9X5Z9
Organism   Variovorax paradoxus strain MGMM5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5160442..5170840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHG62_RS24700 (QHG62_24700) - 5160856..5161092 (+) 237 WP_007838304.1 Fis family transcriptional regulator -
  QHG62_RS24705 (QHG62_24705) purH 5161109..5162716 (+) 1608 WP_281148241.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  QHG62_RS24710 (QHG62_24710) hemL 5162819..5164114 (-) 1296 WP_281148242.1 glutamate-1-semialdehyde 2,1-aminomutase -
  QHG62_RS24715 (QHG62_24715) - 5164114..5165076 (-) 963 WP_281148243.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  QHG62_RS24720 (QHG62_24720) - 5165188..5165358 (+) 171 WP_007838397.1 rubredoxin -
  QHG62_RS24725 (QHG62_24725) pilG 5165442..5165840 (+) 399 WP_126749384.1 response regulator Regulator
  QHG62_RS24730 (QHG62_24730) - 5165840..5166205 (+) 366 WP_281148244.1 response regulator -
  QHG62_RS24735 (QHG62_24735) - 5166225..5166758 (+) 534 WP_281148245.1 chemotaxis protein CheW -
  QHG62_RS24740 (QHG62_24740) - 5166802..5169126 (+) 2325 WP_281148246.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14711.89 Da        Isoelectric Point: 7.2426

>NTDB_id=823628 QHG62_RS24725 WP_126749384.1 5165442..5165840(+) (pilG) [Variovorax paradoxus strain MGMM5]
MGPNGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKINDHKPHLIFCDILMPRLDGYQTCAIIKRNAQFS
NVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGIVQQEVQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=823628 QHG62_RS24725 WP_126749384.1 5165442..5165840(+) (pilG) [Variovorax paradoxus strain MGMM5]
ATGGGGCCGAATGGATCAGGTTACAAGGTGCTTGTCATCGATGACAGCAATACGATCCGGCGCAGTGCCGAAATATTTCT
GAAGCAGGGCGGTCACGAGGTTCTTCTGGCGGAAGACGGCTTTGACGCGCTCTCGAAAATCAATGACCACAAGCCGCATC
TGATTTTCTGCGACATCCTGATGCCTCGCCTGGACGGTTACCAGACCTGCGCCATCATCAAGCGCAATGCTCAATTCTCC
AATGTTCCGGTCGTGATGCTCTCCTCGAAAGACGGCGTCTTCGACAAGGCCCGCGGCCGCATGGTCGGATCGCAAGACTA
CCTGACCAAGCCTTTCACCAAAGACCAGCTGCTGCAGGCCGTGCAGCAGTTTGGCATTGTTCAACAGGAAGTGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3R9X5Z9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.158

86.364

0.545