Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QHG38_RS02045 Genome accession   NZ_CP123979
Coordinates   425621..426289 (+) Length   222 a.a.
NCBI ID   WP_016930642.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SH1275     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 420621..431289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHG38_RS02020 (QHG38_02020) wecB 420926..422065 (+) 1140 WP_037558335.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) -
  QHG38_RS02025 (QHG38_02025) - 422160..423107 (+) 948 WP_037558334.1 LCP family protein -
  QHG38_RS02030 (QHG38_02030) - 423197..424672 (-) 1476 WP_016930640.1 alkaline phosphatase -
  QHG38_RS02035 (QHG38_02035) - 425071..425241 (+) 171 WP_186311691.1 hypothetical protein -
  QHG38_RS02040 (QHG38_02040) - 425427..425591 (+) 165 WP_016930641.1 hypothetical protein -
  QHG38_RS02045 (QHG38_02045) braR 425621..426289 (+) 669 WP_016930642.1 response regulator transcription factor Regulator
  QHG38_RS02050 (QHG38_02050) braS 426292..427188 (+) 897 WP_011274731.1 sensor histidine kinase Regulator
  QHG38_RS02055 (QHG38_02055) - 427370..428119 (+) 750 WP_011274732.1 ABC transporter ATP-binding protein -
  QHG38_RS02060 (QHG38_02060) - 428121..430112 (+) 1992 WP_011274733.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25695.51 Da        Isoelectric Point: 4.6536

>NTDB_id=823522 QHG38_RS02045 WP_016930642.1 425621..426289(+) (braR) [Staphylococcus haemolyticus strain SH1275]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVTVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=823522 QHG38_RS02045 WP_016930642.1 425621..426289(+) (braR) [Staphylococcus haemolyticus strain SH1275]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77