Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QEP20_RS07615 Genome accession   NZ_CP123977
Coordinates   1453781..1454245 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain WH60A     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1448781..1459245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP20_RS07595 (QEP20_07595) kinA 1449248..1451068 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  QEP20_RS07600 (QEP20_07600) dapX 1451078..1452259 (-) 1182 WP_014476653.1 aminotransferase A -
  QEP20_RS07605 (QEP20_07605) - 1452461..1452622 (-) 162 WP_003245246.1 hypothetical protein -
  QEP20_RS07610 (QEP20_07610) cheV 1452826..1453737 (+) 912 WP_029727006.1 chemotaxis protein CheV -
  QEP20_RS07615 (QEP20_07615) kre 1453781..1454245 (-) 465 WP_003232406.1 YkyB family protein Regulator
  QEP20_RS07620 (QEP20_07620) ykuC 1454371..1455663 (-) 1293 WP_029727007.1 MFS transporter -
  QEP20_RS07625 (QEP20_07625) ltdD 1455739..1456233 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  QEP20_RS07630 (QEP20_07630) ppeE 1456285..1457148 (-) 864 WP_029727008.1 metallophosphoesterase -
  QEP20_RS07635 (QEP20_07635) fadH 1457291..1458055 (+) 765 WP_029727009.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=823468 QEP20_RS07615 WP_003232406.1 1453781..1454245(-) (kre) [Bacillus subtilis subsp. subtilis strain WH60A]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=823468 QEP20_RS07615 WP_003232406.1 1453781..1454245(-) (kre) [Bacillus subtilis subsp. subtilis strain WH60A]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1