Detailed information NTG0823459

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: QEP20_RS06105
• Genome accession: NZ_CP123977
• Coordinates: 1182530..1183483 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis subsp. subtilis strain WH60A
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1177530..1188483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QEP20_RS06080 (QEP20_06080)	argF	1179362..1180321 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
QEP20_RS06085 (QEP20_06085)	yjzC	1180407..1180586 (+)	180	WP_003245356.1	YjzC family protein	-
QEP20_RS06090 (QEP20_06090)	yjzD	1180632..1180817 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
QEP20_RS06095 (QEP20_06095)	-	1181066..1181800 (+)	735	WP_003245223.1	hypothetical protein	-
QEP20_RS06100 (QEP20_06100)	-	1181882..1182439 (+)	558	WP_003232974.1	hypothetical protein	-
QEP20_RS06105 (QEP20_06105)	med	1182530..1183483 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
QEP20_RS06110 (QEP20_06110)	comZ	1183498..1183689 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
QEP20_RS06115 (QEP20_06115)	yjzB	1183719..1183958 (-)	240	WP_003232972.1	spore coat protein YjzB	-
QEP20_RS06120 (QEP20_06120)	fabH	1184123..1185061 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
QEP20_RS06125 (QEP20_06125)	fabF	1185084..1186325 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
QEP20_RS06130 (QEP20_06130)	yjaZ	1186401..1187186 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
QEP20_RS06135 (QEP20_06135)	appD	1187378..1188364 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=823459 QEP20_RS06105 WP_003245494.1 1182530..1183483(+) (med) [Bacillus subtilis subsp. subtilis strain WH60A]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=823459 QEP20_RS06105 WP_003245494.1 1182530..1183483(+) (med) [Bacillus subtilis subsp. subtilis strain WH60A]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1