Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QEP20_RS04585 Genome accession   NZ_CP123977
Coordinates   901569..902363 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain WH60A     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896569..907363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP20_RS04555 (QEP20_04555) sxzA 897408..898439 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  QEP20_RS04560 (QEP20_04560) yfhB 898554..899435 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  QEP20_RS04565 (QEP20_04565) yfhC 899523..900107 (+) 585 WP_003243940.1 nitroreductase -
  QEP20_RS04570 (QEP20_04570) yfhD 900146..900337 (-) 192 WP_003233561.1 YfhD family protein -
  QEP20_RS04575 (QEP20_04575) yfhE 900404..900514 (-) 111 WP_003223230.1 YfhE family protein -
  QEP20_RS04580 (QEP20_04580) yfhF 900569..901480 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  QEP20_RS04585 (QEP20_04585) recX 901569..902363 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  QEP20_RS04590 (QEP20_04590) yfhH 902365..902685 (+) 321 WP_029726843.1 YfhH family protein -
  QEP20_RS04595 (QEP20_04595) yfhI 902822..904015 (+) 1194 WP_080477804.1 MFS transporter -
  QEP20_RS04600 (QEP20_04600) sspK 904047..904199 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QEP20_RS04605 (QEP20_04605) yfhJ 904324..904593 (+) 270 WP_003243789.1 YfhJ family protein -
  QEP20_RS04610 (QEP20_04610) yfhK 904738..905256 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  QEP20_RS04615 (QEP20_04615) spdL 905341..905673 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  QEP20_RS04620 (QEP20_04620) ephM 905660..906520 (+) 861 WP_069703773.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=823451 QEP20_RS04585 WP_029726844.1 901569..902363(+) (recX) [Bacillus subtilis subsp. subtilis strain WH60A]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=823451 QEP20_RS04585 WP_029726844.1 901569..902363(+) (recX) [Bacillus subtilis subsp. subtilis strain WH60A]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996