Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QEP20_RS02010 Genome accession   NZ_CP123977
Coordinates   389120..389260 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis subsp. subtilis strain WH60A     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 384120..394260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP20_RS02005 (QEP20_02005) srfAB 385987..389076 (+) 3090 Protein_351 surfactin non-ribosomal peptide synthetase SrfAB -
  QEP20_RS02010 (QEP20_02010) comS 389120..389260 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=823446 QEP20_RS02010 WP_010886404.1 389120..389260(+) (comS) [Bacillus subtilis subsp. subtilis strain WH60A]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=823446 QEP20_RS02010 WP_010886404.1 389120..389260(+) (comS) [Bacillus subtilis subsp. subtilis strain WH60A]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1