Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | R8586_RS09275 | Genome accession | NZ_AP026922 |
| Coordinates | 1784450..1785409 (+) | Length | 319 a.a. |
| NCBI ID | WP_000777242.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700038 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1779450..1790409
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8586_RS09245 (PC0038_18480) | - | 1779650..1780414 (-) | 765 | WP_000082884.1 | nuclear transport factor 2 family protein | - |
| R8586_RS09250 (PC0038_18490) | - | 1780418..1780861 (-) | 444 | WP_000655201.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| R8586_RS09255 (PC0038_18500) | - | 1781543..1781839 (-) | 297 | WP_000840136.1 | bacteriocin immunity protein | - |
| R8586_RS09260 (PC0038_18510) | pepA | 1781861..1782925 (-) | 1065 | WP_000209199.1 | glutamyl aminopeptidase | - |
| R8586_RS09265 (PC0038_18520) | galE | 1783326..1784027 (+) | 702 | WP_000167830.1 | UDP-glucose 4-epimerase GalE | - |
| R8586_RS09270 | - | 1784043..1784153 (+) | 111 | WP_001108391.1 | hypothetical protein | - |
| R8586_RS09275 (PC0038_18530) | ceuB | 1784450..1785409 (+) | 960 | WP_000777242.1 | ABC transporter permease | Machinery gene |
| R8586_RS09280 (PC0038_18540) | - | 1785399..1786355 (+) | 957 | WP_001193676.1 | iron chelate uptake ABC transporter family permease subunit | - |
| R8586_RS09285 (PC0038_18550) | - | 1786352..1787104 (+) | 753 | WP_000764306.1 | ABC transporter ATP-binding protein | - |
| R8586_RS09290 (PC0038_18560) | - | 1787200..1788165 (+) | 966 | WP_000858258.1 | siderophore ABC transporter substrate-binding protein | - |
| R8586_RS09295 (PC0038_18570) | yidD | 1788390..1788632 (-) | 243 | WP_000821640.1 | membrane protein insertion efficiency factor YidD | - |
| R8586_RS09300 (PC0038_18580) | - | 1788632..1789354 (-) | 723 | WP_001222228.1 | pseudouridine synthase | - |
| R8586_RS09305 (PC0038_18590) | scpB | 1789341..1789910 (-) | 570 | WP_000105314.1 | SMC-Scp complex subunit ScpB | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 35388.27 Da Isoelectric Point: 9.7465
>NTDB_id=82337 R8586_RS09275 WP_000777242.1 1784450..1785409(+) (ceuB) [Streptococcus pneumoniae strain PZ900700038]
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKEISESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLGFILLLWRGGRKDAD
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKEISESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLGFILLLWRGGRKDAD
Nucleotide
Download Length: 960 bp
>NTDB_id=82337 R8586_RS09275 WP_000777242.1 1784450..1785409(+) (ceuB) [Streptococcus pneumoniae strain PZ900700038]
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACATGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTGGGGAAAGAAATCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGGCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACATGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTGGGGAAAGAAATCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGGCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
37.742 |
97.179 |
0.367 |