Detailed information NTG0823136

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: R6I08_RS00860
• Genome accession: NZ_CP137696
• Coordinates: 175907..176890 (+)
• Length: 327 a.a.
• NCBI ID: WP_097496444.1
• Uniprot ID: -
• Organism: Escherichia coli isolate FELIX_MS533
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 170907..181890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6I08_RS00840 (R6I08_00840)	dppA	172050..173657 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
R6I08_RS00850 (R6I08_00850)	dppB	173965..174984 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
R6I08_RS00855 (R6I08_00855)	dppC	174994..175896 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
R6I08_RS00860 (R6I08_00860)	amiE	175907..176890 (+)	984	WP_097496444.1	dipeptide ABC transporter ATP-binding protein	Regulator
R6I08_RS00865 (R6I08_00865)	dppF	176887..177891 (+)	1005	WP_097496445.1	dipeptide ABC transporter ATP-binding subunit DppF	-
R6I08_RS00870 (R6I08_00870)	yhjV	177921..179192 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
R6I08_RS00875 (R6I08_00875)	ldrD	179668..179775 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
R6I08_RS00880 (R6I08_00880)	bcsG	179862..181541 (-)	1680	WP_078232868.1	cellulose biosynthesis protein BcsG	-
R6I08_RS00885 (R6I08_00885)	bcsF	181538..181729 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35862.39 Da
• Isoelectric Point: 6.5814

>NTDB_id=823136 R6I08_RS00860 WP_097496444.1 175907..176890(+) (amiE) [Escherichia coli isolate FELIX_MS533]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCMLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=823136 R6I08_RS00860 WP_097496444.1 175907..176890(+) (amiE) [Escherichia coli isolate FELIX_MS533]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCATGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404