Detailed information NTG0823115

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: QHG51_RS09440
• Genome accession: NZ_CP123918
• Coordinates: 2055565..2056218 (+)
• Length: 217 a.a.
• NCBI ID: WP_005029252.1
• Uniprot ID: N9F8A0
• Organism: Acinetobacter bereziniae strain UCO-554
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2050565..2061218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QHG51_RS09405 (QHG51_09410)	kdsB	2050973..2051734 (+)	762	WP_005029263.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QHG51_RS09410 (QHG51_09415)	-	2051772..2052752 (+)	981	WP_005029261.1	DNA polymerase III, delta' subunit	-
QHG51_RS09415 (QHG51_09420)	-	2052779..2053120 (+)	342	WP_004830992.1	PilZ domain-containing protein	-
QHG51_RS09420 (QHG51_09425)	-	2053148..2053921 (+)	774	WP_005029259.1	TatD family hydrolase	-
QHG51_RS09425 (QHG51_09430)	-	2054006..2054620 (+)	615	WP_005029256.1	TetR/AcrR family transcriptional regulator	-
QHG51_RS09430 (QHG51_09435)	-	2054626..2055192 (+)	567	WP_005029254.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
QHG51_RS09435 (QHG51_09440)	xcpV	2055179..2055562 (+)	384	WP_004830987.1	type II secretion system minor pseudopilin GspI	Machinery gene
QHG51_RS09440 (QHG51_09445)	xcpW	2055565..2056218 (+)	654	WP_005029252.1	type II secretion system minor pseudopilin GspJ	Machinery gene
QHG51_RS09445 (QHG51_09450)	gspK	2056211..2057182 (+)	972	WP_004830985.1	type II secretion system minor pseudopilin GspK	-
QHG51_RS09450 (QHG51_09455)	-	2057408..2058004 (+)	597	WP_005029250.1	6-pyruvoyl trahydropterin synthase family protein	-
QHG51_RS09455 (QHG51_09460)	ung	2058079..2058792 (+)	714	WP_004830983.1	uracil-DNA glycosylase	-
QHG51_RS09460 (QHG51_09465)	-	2058789..2059910 (+)	1122	WP_004830982.1	enoyl-CoA hydratase/isomerase family protein	-
QHG51_RS09465 (QHG51_09470)	tadA	2059917..2060441 (+)	525	WP_005029246.1	tRNA adenosine(34) deaminase TadA	-
QHG51_RS09470 (QHG51_09475)	-	2060528..2060962 (+)	435	WP_004830980.1	SRPBCC family protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 25078.60 Da
• Isoelectric Point: 8.2714

>NTDB_id=823115 QHG51_RS09440 WP_005029252.1 2055565..2056218(+) (xcpW) [Acinetobacter bereziniae strain UCO-554]
MNVVQNKNNNTVKMQKRSGFTLIELLVAIAIFAVLSALGWKIFDYLIKVKDRNVMHEENLGQLQGAYQQIQRDTLQIVPI
SARSGEQVEPALRLDRQKLSFSKAGVTDPLKQGLSPYERIEYGYDQQEKKLYRLKYSNLNRNSSEQPLSSVMLTDVDAYQ
IEILNPNESDRWPNDLTKNDSQLPRGIKMKITIHEVEYEWIFSLLNTDFLIKNNQNG

Nucleotide

• Length: 654 bp

>NTDB_id=823115 QHG51_RS09440 WP_005029252.1 2055565..2056218(+) (xcpW) [Acinetobacter bereziniae strain UCO-554]
ATGAACGTCGTCCAAAATAAAAACAATAATACTGTCAAAATGCAGAAAAGATCAGGTTTTACTTTGATTGAGCTACTTGT
CGCAATTGCTATTTTTGCTGTGCTTTCTGCCTTGGGTTGGAAAATATTTGATTATTTGATTAAGGTCAAAGATCGTAATG
TGATGCACGAAGAGAATTTAGGGCAACTCCAAGGTGCATATCAACAAATTCAGCGTGATACATTGCAAATCGTGCCAATT
TCAGCCCGAAGTGGTGAACAAGTTGAACCTGCATTGCGCTTAGATCGACAAAAACTATCATTTAGTAAAGCTGGTGTTAC
AGATCCTTTAAAGCAAGGTCTCTCACCTTATGAGCGAATAGAATACGGTTATGACCAGCAAGAGAAGAAACTATATCGAT
TAAAGTATTCCAATCTGAATCGAAATAGCTCGGAACAACCATTGTCGAGTGTCATGCTGACGGATGTAGATGCCTATCAA
ATTGAAATACTCAATCCAAATGAGTCAGATCGTTGGCCAAATGACTTAACTAAAAATGATAGCCAATTACCGCGTGGAAT
TAAAATGAAAATCACGATTCATGAAGTAGAATATGAGTGGATTTTTAGTTTATTGAATACTGATTTTTTGATAAAGAATA
ATCAAAATGGATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (70-201)

• Prokaryotic N-terminal methylation motif (N_methyl) (14-38)

3D structure

• AlphaFold DB: N9F8A0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	59.813	98.618	0.59