Detailed information    

insolico Bioinformatically predicted

Overview


Name   tonB2   Type   Machinery gene
Locus tag   QHG51_RS02665 Genome accession   NZ_CP123918
Coordinates   565172..566053 (+) Length   293 a.a.
NCBI ID   WP_004825113.1    Uniprot ID   N8X7E6
Organism   Acinetobacter bereziniae strain UCO-554     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 560172..571053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHG51_RS02635 (QHG51_02635) wrbA 560331..560924 (+) 594 WP_004825125.1 NAD(P)H:quinone oxidoreductase -
  QHG51_RS02640 (QHG51_02640) - 561104..561469 (-) 366 WP_005033964.1 hypothetical protein -
  QHG51_RS02645 (QHG51_02645) - 561702..562565 (-) 864 WP_200150090.1 acyl-CoA thioesterase -
  QHG51_RS02650 (QHG51_02650) - 562717..563292 (-) 576 WP_004825120.1 xanthine phosphoribosyltransferase -
  QHG51_RS02655 (QHG51_02655) - 563396..564100 (-) 705 WP_010591293.1 DUF3108 domain-containing protein -
  QHG51_RS02660 (QHG51_02660) - 564255..564941 (-) 687 WP_005033958.1 hypothetical protein -
  QHG51_RS02665 (QHG51_02665) tonB2 565172..566053 (+) 882 WP_004825113.1 energy transducer TonB Machinery gene
  QHG51_RS02670 (QHG51_02670) - 566129..566611 (-) 483 WP_005033955.1 ankyrin repeat domain-containing protein -
  QHG51_RS02675 (QHG51_02675) - 566718..567002 (-) 285 WP_004825107.1 antibiotic biosynthesis monooxygenase family protein -
  QHG51_RS02680 (QHG51_02680) - 567101..568012 (-) 912 WP_004825105.1 bestrophin family protein -
  QHG51_RS02685 (QHG51_02685) radC 568051..568773 (-) 723 WP_004825103.1 RadC family protein -
  QHG51_RS02690 (QHG51_02690) coaBC 568888..570153 (+) 1266 WP_005033953.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  QHG51_RS02695 (QHG51_02695) - 570318..570692 (+) 375 WP_004825098.1 cytochrome b562 -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33348.89 Da        Isoelectric Point: 8.3470

>NTDB_id=823103 QHG51_RS02665 WP_004825113.1 565172..566053(+) (tonB2) [Acinetobacter bereziniae strain UCO-554]
MIKKLFANTQHTGYWWQDALFVGAVSIAVIVHGLFLSVQFGMPQENNTATKEIAVSIRPSEDKVKDADFLAQADQQGSGT
FRKEHRMSSDMPAQAEDKSAGDQQLEALEQIQQKRELKFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKAAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
ESSGHAILDEAAKNSVRKGAPFGRFDAKMKDISELRIVRTWRFDPAESEFEVH

Nucleotide


Download         Length: 882 bp        

>NTDB_id=823103 QHG51_RS02665 WP_004825113.1 565172..566053(+) (tonB2) [Acinetobacter bereziniae strain UCO-554]
ATGATAAAAAAATTATTTGCCAATACGCAACATACTGGGTACTGGTGGCAAGATGCATTATTTGTCGGGGCAGTTTCAAT
TGCTGTAATTGTCCACGGGTTATTTTTATCTGTGCAATTTGGTATGCCGCAAGAAAATAATACTGCGACAAAAGAAATTG
CTGTCAGTATTCGCCCAAGTGAAGATAAAGTCAAAGATGCTGATTTCCTTGCGCAAGCAGATCAACAAGGTTCAGGAACC
TTTCGTAAAGAACATCGGATGTCCTCTGATATGCCAGCACAAGCTGAAGATAAAAGTGCAGGGGATCAACAGCTTGAAGC
TTTAGAGCAAATACAGCAAAAACGTGAATTAAAATTTGAAGAAAAAGTGCTGATGACCGTTTTAAGTTGGCAAAAGCAAG
CTGAACAAAACGATCGAAAAAAGGCAATGGAAGAATTACAAAGCCAAATGCAAGCCAAAGCCGCGATGGTGGCGAGCTTA
GAAGCACAATATTTACAAAAGCAGCAAAATTTTAGTAAACAACAAAAAATTAAAACCTTAGATGGCATTCAAGCGAAACA
AGATGCATCGGCTGGTTATTTGGATAAATTCCGTGAAAAAGTCGAAATGTATGGCAACCGCTATTATCCTGATCTTGCTA
AGCAACAGCGCCTTTCAGGTGAAGTTCGTTTAATGGTGATTCTGAATAATGAAGGGGGAATACGGGCAATTCGTTTAATC
GAAAGTTCAGGTCATGCCATTTTAGATGAAGCCGCTAAAAATTCGGTACGTAAGGGTGCTCCATTTGGACGTTTTGATGC
AAAAATGAAAGATATTTCTGAACTACGAATTGTCAGAACGTGGCGTTTCGATCCCGCTGAGTCTGAATTTGAAGTCCATT
AG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N8X7E6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

72.109

100

0.724