Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   R6Y88_RS10710 Genome accession   NZ_CP137687
Coordinates   2110313..2111140 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain YT-4     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2105313..2116140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6Y88_RS10685 abrB 2107659..2107949 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  R6Y88_RS10690 rsmI 2107998..2108876 (-) 879 WP_041517603.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  R6Y88_RS10695 yazA 2108851..2109150 (-) 300 WP_014475567.1 GIY-YIG nuclease family protein -
  R6Y88_RS10700 trmNF 2109137..2109880 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  R6Y88_RS10705 yabA 2109939..2110298 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  R6Y88_RS10710 yaaT 2110313..2111140 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  R6Y88_RS10715 holB 2111143..2112132 (-) 990 WP_015482689.1 DNA polymerase III subunit delta' -
  R6Y88_RS10720 yaaR 2112144..2112584 (-) 441 WP_015382556.1 YaaR family protein -
  R6Y88_RS10725 darA 2112597..2112926 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  R6Y88_RS10730 tmk 2113000..2113638 (-) 639 WP_003243137.1 dTMP kinase -
  R6Y88_RS10735 efpO 2113635..2115077 (-) 1443 WP_046340193.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=822802 R6Y88_RS10710 WP_003226767.1 2110313..2111140(-) (yaaT) [Bacillus subtilis strain YT-4]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=822802 R6Y88_RS10710 WP_003226767.1 2110313..2111140(-) (yaaT) [Bacillus subtilis strain YT-4]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTCAGAGAGCTTGTAAAGGATTTGG
CATCTATCTTTAAGACAAGGATTGAGCTGCGCCAAATAGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996