Detailed information NTG0822752

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: R6Y88_RS04200
• Genome accession: NZ_CP137687
• Coordinates: 867369..868505 (-)
• Length: 378 a.a.
• NCBI ID: WP_080030661.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YT-4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 862369..873505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6Y88_RS04160	xre	862705..863046 (+)	342	WP_003232719.1	HTH-type transcriptional regulator Xre	-
R6Y88_RS04165	xkdA	863208..863804 (+)	597	WP_015483120.1	ImmA/IrrE family metallo-endopeptidase	-
R6Y88_RS04170	xpdC	863848..864684 (-)	837	WP_003245071.1	manganese catalase family protein	-
R6Y88_RS04175	pghB	864761..865363 (-)	603	WP_015383421.1	poly-gamma-glutamate hydrolase family protein	-
R6Y88_RS04180	yjqA	865468..865845 (+)	378	WP_015483119.1	PH domain-containing protein	-
R6Y88_RS04185	xlyB	865885..866838 (-)	954	WP_015483118.1	N-acetylmuramoyl-L-alanine amidase	-
R6Y88_RS04190	yjpA	866958..867215 (+)	258	WP_003232731.1	YciI family protein	-
R6Y88_RS04195	phrA	867245..867379 (-)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
R6Y88_RS04200	rapC	867369..868505 (-)	1137	WP_080030661.1	response regulator aspartate phosphatase RapA	Regulator
R6Y88_RS04205	yjoB	868650..869921 (-)	1272	WP_015383418.1	ATPase YjoB	-
R6Y88_RS04210	bstD	870070..870534 (+)	465	WP_015383417.1	DinB family protein	-
R6Y88_RS04215	yjnA	870759..871523 (+)	765	WP_014476525.1	sulfite exporter TauE/SafE family protein	-
R6Y88_RS04220	uxaA	871562..873055 (-)	1494	WP_015383416.1	UxaA family hydrolase	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 45032.20 Da
• Isoelectric Point: 4.7189

>NTDB_id=822752 R6Y88_RS04200 WP_080030661.1 867369..868505(-) (rapC) [Bacillus subtilis strain YT-4]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=822752 R6Y88_RS04200 WP_080030661.1 867369..868505(-) (rapC) [Bacillus subtilis strain YT-4]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACTGGGCTTCTCGATTATTACTTTAACTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCTCTCG
TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCCGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCCGCCCTATATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATAGACACAGAATCAGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

• Tetratricopeptide repeat (TPR_12) (221-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	45.213	99.471	0.45
rapF	Bacillus subtilis subsp. subtilis str. 168	41.425	100	0.415