Detailed information NTG0822693

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: R6U80_RS09895
• Genome accession: NZ_CP137623
• Coordinates: 2037808..2040630 (-)
• Length: 940 a.a.
• NCBI ID: WP_017864935.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain NCK401
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2032808..2045630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6U80_RS09875 (R6U80_09875)	-	2034716..2035063 (-)	348	WP_023189066.1	DUF722 domain-containing protein	-
R6U80_RS09880 (R6U80_09880)	-	2035686..2036261 (+)	576	WP_313791927.1	helix-turn-helix domain-containing protein	-
R6U80_RS09885 (R6U80_09885)	-	2036273..2036857 (+)	585	WP_023189068.1	hypothetical protein	-
R6U80_RS09890 (R6U80_09890)	-	2036994..2037575 (-)	582	WP_033899885.1	uracil-DNA glycosylase family protein	-
R6U80_RS09895 (R6U80_09895)	uvrA	2037808..2040630 (-)	2823	WP_017864935.1	excinuclease ABC subunit UvrA	Machinery gene
R6U80_RS09900 (R6U80_09900)	-	2040709..2041347 (-)	639	WP_098397296.1	hypothetical protein	-
R6U80_RS09905 (R6U80_09905)	-	2041416..2041940 (+)	525	WP_015426995.1	histidine phosphatase family protein	-
R6U80_RS09910 (R6U80_09910)	-	2041937..2042251 (+)	315	WP_010906152.1	GIY-YIG nuclease family protein	-
R6U80_RS09915 (R6U80_09915)	-	2042265..2043614 (-)	1350	WP_017864937.1	amino acid permease	-
R6U80_RS09920 (R6U80_09920)	-	2044097..2045014 (-)	918	WP_021722658.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104311.16 Da
• Isoelectric Point: 6.4770

>NTDB_id=822693 R6U80_RS09895 WP_017864935.1 2037808..2040630(-) (uvrA) [Lactococcus lactis strain NCK401]
MPQDKIVIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIDG
LSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPYCVNGHGKISAQSVEEIVEQILELPEKTRLQILAPVVRTK
KGTHVKMFERIQKDGYVRVRVDGEVYDISEVPELDKNKKHNIEIVIDRIVVKEGIRSRLFDSVEAALHQAEGYVIVDKMD
GSELLFSEFYACPVCGFTVPELEPRLFSFNAPFGSCPDCDGLGVKLEPDVDLLIPDTSKTLREGAIIYWYGKASTYYPAL
LEQAMEQFGIDLDRPWEKLSEKEQQIVLYGNGDKLFHFLHEGDFGLRDQDMTFVGVIPNLWRRYRSGMSESAREMARSYM
TELTCTTCHGYRLNDQALSVKVGEKNIAEFSILSIGDTLDYVKSLVLSANNEIIAKPILKEIKDRLTFLKNVGLDYLTLS
RSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTLIVVEHDEDTMMAADWLIDVG
PGAGDLGGEIIASGTPKQVMKNKKSLTGQYLSGKRAIPVPEKRRAIDKKKMVKITGASENNLQNLDVEFPMGVMTAVTGV
SGSGKSTLVNSILKKSLAQKLNHNSEKPGKHKKITGYEGIERLIDIDQSPIGRTPRSNPATYTSVFDDIRDLFANTNEAK
IRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKGKNISEVLDMRVSDGLEFFRH
IPKIERKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLASELQKRSNGKAFYILDEPTTGLHSEDIATLIQVLDRLVEQG
NTIVVIEHNLDVIKTADYIIDLGPEGGAGGGTILAKGRPEEVAKVADSYTGQYLKAKLEK

Nucleotide

• Length: 2823 bp

>NTDB_id=822693 R6U80_RS09895 WP_017864935.1 2037808..2040630(-) (uvrA) [Lactococcus lactis strain NCK401]
ATGCCACAAGATAAAATAGTAATACATGGTGCACGTGAGCACAATTTAAAAAATATAGATGTTGAAATTCCAAGAGATAA
ATTAGTTGTTGTTACTGGGGTTTCAGGGTCTGGGAAATCATCTCTGGCCTTTGAAACTTTATATGCAGAAGGTCAACGTC
GATATGTTGAATCTTTGTCAGCTTATGCCAGACAGTTTTTAGGAAATATGGATAAACCAGATGTTGATTCAATTGATGGT
TTGTCGCCAGCAATCTCTATTGACCAAAAAACAACTTCTAAAAATCCTCGCTCAACAGTCGGGACGGTTACGGAAATTAA
TGACTATTTGCGTCTATTATACGCCCGTGTTGGGACGCCATATTGTGTGAATGGTCATGGAAAAATTTCGGCACAGTCAG
TTGAAGAAATTGTTGAACAAATTCTTGAACTCCCTGAAAAAACACGTTTACAAATTCTCGCTCCTGTCGTACGTACCAAA
AAAGGGACTCATGTTAAAATGTTTGAGCGTATCCAAAAAGATGGTTATGTTCGTGTTCGTGTTGATGGCGAAGTTTATGA
TATTTCAGAAGTTCCAGAACTTGATAAAAATAAAAAGCACAACATTGAAATTGTTATTGACCGGATTGTTGTAAAAGAAG
GAATTCGTTCGCGTCTTTTTGACTCTGTAGAGGCTGCGCTTCATCAGGCTGAGGGTTATGTTATTGTTGATAAAATGGAT
GGTTCAGAGCTTCTATTTAGTGAATTTTATGCCTGTCCAGTTTGTGGATTTACCGTTCCAGAACTTGAACCACGTCTTTT
CTCATTCAATGCTCCTTTTGGCTCATGCCCAGATTGTGATGGTTTAGGAGTTAAATTGGAACCCGATGTCGATTTATTGA
TTCCTGATACAAGCAAAACACTGCGTGAGGGAGCAATTATCTATTGGTATGGGAAAGCCTCAACTTATTACCCTGCTCTT
TTAGAGCAAGCAATGGAGCAATTCGGCATTGATTTAGATAGGCCTTGGGAAAAACTTTCAGAAAAAGAACAACAAATTGT
TTTATATGGAAATGGAGATAAACTTTTCCATTTTCTGCACGAAGGAGATTTTGGATTACGTGACCAAGATATGACCTTTG
TTGGGGTCATTCCTAATCTTTGGCGTCGTTATCGTTCAGGAATGAGCGAGTCAGCTAGAGAAATGGCGCGTTCTTACATG
ACTGAATTGACTTGTACGACTTGTCATGGTTATCGTTTAAATGATCAAGCACTTTCTGTTAAAGTGGGAGAGAAAAATAT
TGCTGAATTTTCAATTCTGTCAATTGGTGATACACTTGATTATGTGAAAAGTTTAGTTCTTTCTGCAAATAATGAAATTA
TCGCAAAACCTATTTTGAAAGAAATTAAAGACCGTTTGACTTTCTTGAAAAATGTTGGTTTGGATTATCTTACGCTATCT
CGTTCAAGCGGAACACTTTCTGGTGGAGAGTCACAACGCATTCGTTTAGCGACACAAATTGGTTCAAATTTATCAGGCGT
TTTGTATATTCTGGATGAACCTTCCATTGGTTTACATCAAAGAGATAATGACAGATTGATTGAGTCTTTACAAAAGATGC
GTGATTTGGGGAATACCTTAATTGTCGTTGAACATGATGAGGACACGATGATGGCAGCCGATTGGCTCATTGATGTTGGC
CCTGGGGCAGGTGATTTAGGAGGTGAAATTATTGCCTCTGGAACACCAAAACAAGTCATGAAAAATAAAAAATCACTGAC
AGGGCAATATTTGTCAGGAAAAAGAGCCATTCCAGTTCCTGAAAAACGTCGAGCCATTGATAAGAAAAAAATGGTCAAGA
TTACAGGTGCAAGTGAGAACAACTTGCAAAACCTTGACGTTGAGTTTCCAATGGGAGTTATGACGGCTGTAACTGGGGTT
TCTGGTTCTGGTAAATCAACTTTAGTTAACAGTATTTTAAAGAAATCATTAGCTCAAAAATTGAATCACAACTCAGAGAA
ACCTGGTAAGCATAAAAAAATTACTGGTTATGAAGGAATTGAGCGTTTGATTGATATTGACCAAAGTCCAATTGGTCGAA
CTCCACGTTCAAATCCGGCTACTTATACCAGCGTCTTTGATGACATTCGTGATTTATTTGCCAATACAAATGAAGCAAAA
ATTCGTGGTTATAAAAAAGGACGTTTCTCATTTAATGTCAAAGGTGGACGTTGTGAAGCCTGTTCTGGTGATGGAATCAT
CAAAATTGAAATGCATTTCTTGCCGGATGTTTATGTTCCATGTGAAGTTTGCCATGGCAGACGTTACAATTCAGAAACTT
TAGAAGTTCATTATAAAGGGAAGAATATTTCGGAAGTACTCGATATGCGCGTGTCTGATGGCTTGGAATTCTTCCGTCAT
ATTCCAAAAATTGAACGTAAACTCCAAACGATTGTTGATGTAGGTTTGGGATATGTGACGCTTGGACAACCGGCAACTAC
TTTATCAGGTGGGGAAGCTCAACGGATGAAATTAGCTTCTGAATTACAAAAACGTTCAAATGGTAAAGCTTTTTATATCT
TGGATGAACCAACAACTGGTTTGCACAGTGAAGATATTGCGACCCTGATTCAAGTATTAGACCGTTTGGTTGAACAAGGA
AATACGATTGTTGTCATTGAACATAATTTGGACGTTATTAAAACAGCAGATTACATCATCGACTTAGGTCCAGAAGGTGG
TGCTGGTGGTGGAACAATTCTTGCTAAAGGAAGACCAGAAGAAGTTGCAAAAGTTGCTGACAGCTATACTGGTCAGTATT
TGAAAGCAAAATTGGAAAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-239)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-395)

• ABC transporter (ABC_tran) (622-858)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	77.553	100	0.776
uvrA	Streptococcus pneumoniae TIGR4	77.553	100	0.776
uvrA	Streptococcus pneumoniae D39	77.553	100	0.776