Detailed information NTG0822616

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: QFB56_RS10790
• Genome accession: NZ_CP123765
• Coordinates: 2197044..2197799 (-)
• Length: 251 a.a.
• NCBI ID: WP_032057017.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP8900
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2192044..2202799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QFB56_RS10760 (QFB56_10760)	-	2192352..2192792 (-)	441	WP_002121449.1	SRPBCC family protein	-
QFB56_RS10765 (QFB56_10765)	tadA	2192863..2193366 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
QFB56_RS10770 (QFB56_10770)	hibch	2193372..2194496 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
QFB56_RS10775 (QFB56_10775)	ung	2194493..2195206 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
QFB56_RS10780 (QFB56_10780)	-	2195260..2195856 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
QFB56_RS10785 (QFB56_10785)	gspK	2196084..2197043 (-)	960	WP_005076277.1	type II secretion system minor pseudopilin GspK	-
QFB56_RS10790 (QFB56_10790)	xcpW	2197044..2197799 (-)	756	WP_032057017.1	type II secretion system minor pseudopilin GspJ	Machinery gene
QFB56_RS10795 (QFB56_10795)	xcpV	2197799..2198179 (-)	381	WP_032057019.1	type II secretion system minor pseudopilin GspI	Machinery gene
QFB56_RS10800 (QFB56_10800)	-	2198169..2198723 (-)	555	WP_005069534.1	type II secretion system protein	-
QFB56_RS10805 (QFB56_10805)	-	2198730..2199338 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
QFB56_RS10810 (QFB56_10810)	ycfH	2199375..2200148 (-)	774	WP_017399499.1	TatD family hydrolase	-
QFB56_RS10815 (QFB56_10815)	pilZ	2200166..2200507 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
QFB56_RS10820 (QFB56_10820)	holB	2200518..2201498 (-)	981	WP_032057020.1	DNA polymerase III subunit delta'	-
QFB56_RS10825 (QFB56_10825)	kdsB	2201512..2202273 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28696.96 Da
• Isoelectric Point: 9.5669

>NTDB_id=822616 QFB56_RS10790 WP_032057017.1 2197044..2197799(-) (xcpW) [Acinetobacter pittii strain AP8900]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=822616 QFB56_RS10790 WP_032057017.1 2197044..2197799(-) (xcpW) [Acinetobacter pittii strain AP8900]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAATTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80	99.602	0.797