Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   QFB56_RS02545 Genome accession   NZ_CP123765
Coordinates   511389..512273 (+) Length   294 a.a.
NCBI ID   WP_032057394.1    Uniprot ID   A0AAE9M991
Organism   Acinetobacter pittii strain AP8900     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 506389..517273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFB56_RS02520 (QFB56_02520) - 506699..507946 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  QFB56_RS02525 (QFB56_02525) wrbA 508311..508913 (+) 603 WP_280928953.1 NAD(P)H:quinone oxidoreductase -
  QFB56_RS02530 (QFB56_02530) xpt 508965..509540 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  QFB56_RS02535 (QFB56_02535) - 509613..510326 (-) 714 WP_014207724.1 DUF3108 domain-containing protein -
  QFB56_RS02540 (QFB56_02540) - 510485..511156 (-) 672 WP_032057392.1 hypothetical protein -
  QFB56_RS02545 (QFB56_02545) tonB2 511389..512273 (+) 885 WP_032057394.1 TonB family protein Machinery gene
  QFB56_RS02550 (QFB56_02550) ybeY 512325..512801 (-) 477 WP_017481656.1 rRNA maturation RNase YbeY -
  QFB56_RS02555 (QFB56_02555) phoL 512811..513899 (-) 1089 WP_002119513.1 PhoH family protein -
  QFB56_RS02560 (QFB56_02560) miaB 513937..515388 (-) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33693.20 Da        Isoelectric Point: 7.6767

>NTDB_id=822610 QFB56_RS02545 WP_032057394.1 511389..512273(+) (tonB2) [Acinetobacter pittii strain AP8900]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPRLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=822610 QFB56_RS02545 WP_032057394.1 511389..512273(+) (tonB2) [Acinetobacter pittii strain AP8900]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCCGCAACAATATT
GGCAATCTTACTGCATATTTTTGTATTGCTCATTCACTTTGCCATGCCTAGCCCCTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCATCAGGCAGATTTTTTGGCACAAGCAGATCAGCAAGGCTCGGGCGCC
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGAGGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCATCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGACGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCCATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATTAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTTATTTTGAATGCTCAAGGCGGAATTCGTGCAATCCGTCTG
CTTGAAAGCTCAGGGCATTCAATACTAGATGAAGCTGCTAAGTCTTCAGTACGTCGCGGTGCACCATTTGGACATTTTGA
TGCCAACATGAAAGATATTTCGGAGTTACGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

87.755

100

0.878