Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   R9C51_RS07945 Genome accession   NZ_AP026921
Coordinates   1541941..1542618 (-) Length   225 a.a.
NCBI ID   WP_000548994.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700027     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1536941..1547618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R9C51_RS07920 (PC0027_15720) - 1537104..1537733 (-) 630 WP_050115971.1 NAD(P)-dependent oxidoreductase -
  R9C51_RS07925 (PC0027_15730) - 1538601..1538741 (+) 141 WP_000422775.1 MazG-like protein -
  R9C51_RS07930 (PC0027_15740) - 1538748..1538924 (+) 177 WP_000166031.1 MazG-like protein -
  R9C51_RS07935 (PC0027_15750) thrS 1538982..1540925 (+) 1944 WP_000608349.1 threonine--tRNA ligase -
  R9C51_RS07940 (PC0027_15760) - 1540974..1541948 (-) 975 WP_000887972.1 HAMP domain-containing histidine kinase -
  R9C51_RS07945 (PC0027_15770) braR 1541941..1542618 (-) 678 WP_000548994.1 response regulator transcription factor Regulator
  R9C51_RS07950 (PC0027_15780) - 1542774..1543847 (+) 1074 WP_317826301.1 DUF2974 domain-containing protein -
  R9C51_RS07955 (PC0027_15790) - 1543938..1544240 (-) 303 WP_000281594.1 hypothetical protein -
  R9C51_RS07960 (PC0027_15800) - 1544309..1544746 (-) 438 WP_001166786.1 Rrf2 family transcriptional regulator -
  R9C51_RS07965 (PC0027_15810) - 1544822..1545664 (-) 843 WP_000160958.1 metallophosphoesterase -
  R9C51_RS07970 (PC0027_15820) - 1545776..1546426 (+) 651 WP_000188498.1 metal-dependent transcriptional regulator -
  R9C51_RS07975 (PC0027_15830) - 1546543..1547164 (+) 622 Protein_1582 nicotinamide mononucleotide transporter -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25966.13 Da        Isoelectric Point: 5.1362

>NTDB_id=82214 R9C51_RS07945 WP_000548994.1 1541941..1542618(-) (braR) [Streptococcus pneumoniae strain PZ900700027]
MHKILLVEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYTGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=82214 R9C51_RS07945 WP_000548994.1 1541941..1542618(-) (braR) [Streptococcus pneumoniae strain PZ900700027]
ATGCACAAGATTTTATTAGTGGAAGATGATCAGGTCATTCGTCAACAGGTCGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCAGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCCAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATACTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.083

96.889

0.476

Multiple sequence alignment