Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R9C51_RS03075 Genome accession   NZ_AP026921
Coordinates   579024..579290 (+) Length   88 a.a.
NCBI ID   WP_001820593.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700027     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 574024..584290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R9C51_RS03055 (PC0027_06030) - 574279..574788 (+) 510 WP_000619950.1 N-acetyltransferase -
  R9C51_RS03060 (PC0027_06040) pheT 574865..577270 (+) 2406 WP_050232733.1 phenylalanine--tRNA ligase subunit beta -
  R9C51_RS03065 (PC0027_06050) - 577338..578339 (-) 1002 WP_033705498.1 endonuclease/exonuclease/phosphatase family protein -
  R9C51_RS03070 - 578495..578940 (+) 446 Protein_606 helix-turn-helix domain-containing protein -
  R9C51_RS03075 (PC0027_06080) HI0659 579024..579290 (+) 267 WP_001820593.1 helix-turn-helix domain-containing protein Machinery gene
  R9C51_RS03080 (PC0027_06090) metE 579551..581800 (+) 2250 WP_000108187.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R9C51_RS03085 (PC0027_06100) metF 581864..582730 (+) 867 WP_000089989.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9670.12 Da        Isoelectric Point: 4.3934

>NTDB_id=82173 R9C51_RS03075 WP_001820593.1 579024..579290(+) (HI0659) [Streptococcus pneumoniae strain PZ900700027]
MEGCPSELFSKEEILESDMRVAIMSELIEARHEQGINQRKLEELSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=82173 R9C51_RS03075 WP_001820593.1 579024..579290(+) (HI0659) [Streptococcus pneumoniae strain PZ900700027]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATTATGAGCGAGTT
GATTGAAGCTAGACATGAACAAGGAATCAATCAGAGAAAGCTAGAAGAACTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

55.844

87.5

0.489

Multiple sequence alignment