Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QEP22_RS16005 Genome accession   NZ_CP123578
Coordinates   2993229..2993423 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain HyangYak-01     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2988229..2998423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP22_RS15980 galT 2988294..2989817 (+) 1524 WP_043980492.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  QEP22_RS15985 - 2989860..2990744 (-) 885 WP_080781641.1 NAD(P)-dependent oxidoreductase -
  QEP22_RS15990 - 2990947..2991135 (-) 189 WP_013055400.1 YjzD family protein -
  QEP22_RS15995 - 2991345..2992085 (+) 741 WP_043980490.1 hypothetical protein -
  QEP22_RS16000 - 2992267..2993151 (+) 885 WP_016763037.1 NAD(P)-dependent oxidoreductase -
  QEP22_RS16005 comZ 2993229..2993423 (+) 195 WP_013081746.1 ComZ family protein Regulator
  QEP22_RS16010 - 2993452..2993652 (-) 201 WP_016763038.1 hypothetical protein -
  QEP22_RS16015 - 2993909..2994847 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  QEP22_RS16020 fabF 2994887..2996128 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  QEP22_RS16025 - 2996235..2997008 (+) 774 WP_060746425.1 DUF2268 domain-containing protein -
  QEP22_RS16030 - 2997235..2998257 (+) 1023 WP_028407466.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=821336 QEP22_RS16005 WP_013081746.1 2993229..2993423(+) (comZ) [Priestia megaterium strain HyangYak-01]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=821336 QEP22_RS16005 WP_013081746.1 2993229..2993423(+) (comZ) [Priestia megaterium strain HyangYak-01]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563