Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QEP22_RS02215 Genome accession   NZ_CP123578
Coordinates   401629..402579 (-) Length   316 a.a.
NCBI ID   WP_097822768.1    Uniprot ID   -
Organism   Priestia megaterium strain HyangYak-01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 396629..407579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP22_RS02190 - 397373..397513 (-) 141 WP_013057884.1 hypothetical protein -
  QEP22_RS02195 - 397773..398627 (-) 855 WP_280559970.1 manganese catalase family protein -
  QEP22_RS02200 - 398957..399913 (-) 957 WP_176584225.1 siderophore ABC transporter substrate-binding protein -
  QEP22_RS02205 - 399937..400695 (-) 759 WP_043981407.1 ABC transporter ATP-binding protein -
  QEP22_RS02210 - 400689..401636 (-) 948 WP_060746379.1 iron chelate uptake ABC transporter family permease subunit -
  QEP22_RS02215 ceuB 401629..402579 (-) 951 WP_097822768.1 ABC transporter permease Machinery gene
  QEP22_RS02220 - 403132..403938 (-) 807 WP_280559974.1 cell wall hydrolase -
  QEP22_RS02225 - 404301..404555 (+) 255 WP_013057893.1 hypothetical protein -
  QEP22_RS02230 - 404637..404801 (-) 165 WP_013057894.1 hypothetical protein -
  QEP22_RS02235 - 405127..405690 (-) 564 WP_028409265.1 NAD(P)H-dependent oxidoreductase -
  QEP22_RS02240 lepB 405975..406535 (-) 561 WP_043981403.1 signal peptidase I -
  QEP22_RS02245 - 406619..406975 (-) 357 WP_043981402.1 DUF4440 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34951.13 Da        Isoelectric Point: 9.9188

>NTDB_id=821292 QEP22_RS02215 WP_097822768.1 401629..402579(-) (ceuB) [Priestia megaterium strain HyangYak-01]
MKFYQLILVFAVLAVSSLFIGVQDLSATDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=821292 QEP22_RS02215 WP_097822768.1 401629..402579(-) (ceuB) [Priestia megaterium strain HyangYak-01]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCAGTTTCGTCTCTTTTTATAGGCGTACAAGATCTGTCAGC
GACGGATCTCTTTCATTTAACAAAAGAAGAAAGTCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCAGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCGTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTGGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53

94.937

0.503