Detailed information NTG0820723

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QEP15_RS21690
• Genome accession: NZ_CP123364
• Coordinates: 4745935..4746975 (-)
• Length: 346 a.a.
• NCBI ID: WP_226849524.1
• Uniprot ID: -
• Organism: Achromobacter mucicolens strain Y3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4740935..4751975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QEP15_RS21670 (QEP15_21670)	phnC	4741440..4742210 (+)	771	WP_128828945.1	phosphonate ABC transporter ATP-binding protein	-
QEP15_RS21675 (QEP15_21675)	phnE	4742207..4743094 (+)	888	WP_062839588.1	phosphonate ABC transporter, permease protein PhnE	-
QEP15_RS21680 (QEP15_21680)	phnE	4743091..4743915 (+)	825	WP_056325416.1	phosphonate ABC transporter, permease protein PhnE	-
QEP15_RS21685 (QEP15_21685)	-	4744162..4745820 (+)	1659	WP_280148042.1	CYTH and CHAD domain-containing protein	-
QEP15_RS21690 (QEP15_21690)	pilA	4745935..4746975 (-)	1041	WP_226849524.1	signal recognition particle-docking protein FtsY	Machinery gene
QEP15_RS21695 (QEP15_21695)	rsmD	4747442..4748047 (+)	606	WP_056325409.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QEP15_RS21700 (QEP15_21700)	coaD	4748066..4748569 (+)	504	WP_056558877.1	pantetheine-phosphate adenylyltransferase	-
QEP15_RS21705 (QEP15_21705)	-	4748683..4748934 (+)	252	WP_042795127.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QEP15_RS21710 (QEP15_21710)	-	4748931..4750154 (+)	1224	WP_280148044.1	benzoate/H(+) symporter BenE family transporter	-
QEP15_RS21715 (QEP15_21715)	-	4750174..4750560 (-)	387	WP_217618999.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 35996.48 Da
• Isoelectric Point: 8.5379

>NTDB_id=820723 QEP15_RS21690 WP_226849524.1 4745935..4746975(-) (pilA) [Achromobacter mucicolens strain Y3]
MAPTPAPVVPAPAPVSAPAPVSTPAPVAAPAPVPEPAPAEAPKKASWLSRLKQGLSRTGQSIGGIFVGVKVDENLFEELE
SALIMADAGLEATEKLLTALRARVKKERIEDPAKVKTALRQLLADHLRPLERAFDLKRTQPLVVMIAGVNGAGKTTSIGK
LAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVSVISQDGGDPAAVAFDSVNAGRARGMGVVMVDTAGRLPTQLHL
MEELKKIRRVIGKADASAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVY
WIGVGESLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1041 bp

>NTDB_id=820723 QEP15_RS21690 WP_226849524.1 4745935..4746975(-) (pilA) [Achromobacter mucicolens strain Y3]
ATCGCGCCCACGCCTGCACCCGTGGTCCCGGCGCCTGCGCCGGTATCAGCGCCTGCGCCAGTATCCACGCCTGCCCCTGT
TGCAGCCCCCGCACCCGTCCCGGAACCCGCACCCGCCGAGGCGCCCAAGAAGGCCTCGTGGCTGTCGCGCCTGAAGCAGG
GCTTGTCGCGCACCGGTCAGAGCATTGGCGGCATCTTCGTCGGCGTTAAGGTCGACGAGAACCTGTTCGAGGAACTCGAA
TCGGCCCTCATTATGGCCGATGCGGGCCTTGAGGCCACCGAGAAGCTCCTGACCGCGCTGCGCGCGCGCGTCAAGAAGGA
ACGCATCGAGGACCCGGCCAAGGTGAAGACGGCCCTGCGCCAGTTGCTGGCCGATCACCTGCGCCCACTGGAGCGCGCGT
TTGACCTGAAGCGCACGCAACCGCTGGTGGTGATGATTGCCGGCGTGAACGGCGCGGGCAAGACGACTTCCATCGGCAAG
CTGGCGCATACGTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCCGCCGGCGACACCTTCCGTGCCGCCGCGCGCGAGCA
ACTGGTGGAATGGGGCAGCCGCAACAACGTCAGCGTGATTTCGCAGGACGGCGGCGATCCGGCCGCGGTGGCGTTCGACT
CGGTCAACGCCGGCCGCGCACGCGGCATGGGCGTGGTGATGGTGGATACCGCCGGCCGCCTGCCCACGCAGCTGCACCTG
ATGGAAGAACTGAAGAAGATCCGCCGCGTCATCGGCAAGGCGGATGCGTCCGCGCCGCATGAGGTGCTGCTGGTGGTGGA
TGGCAACACGGGGCAGAATGCGCTGGCGCAGATCCGCGCGTTTGACGCTGCCATCAACCTGACCGGTCTGGTCGTGACCA
AGCTGGACGGCACGGCCAAGGGCGGCACGCTGGCGGCCGTTGCTGCCGGCAGCCAGGGCGTGCGTCCGGTGCCGGTGTAT
TGGATTGGCGTGGGCGAAAGCCTGGAAGACCTGCAGCCCTTCGTGGCGGACGAGTTCGCGGCGGCATTGCTGGCGGATTG
A

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (142-344)

• SRP54-type protein, helical bundle domain (SRP54_N) (60-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.386	92.775	0.523