Detailed information NTG0820582

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: R5028_RS22105
• Genome accession: NZ_CP137486
• Coordinates: 4704410..4705435 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain HPA2660
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4699410..4710435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R5028_RS22080 (R5028_22080)	aroE	4699612..4700436 (-)	825	WP_003097314.1	shikimate dehydrogenase	-
R5028_RS22085 (R5028_22085)	hemF	4700494..4701411 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
R5028_RS22090 (R5028_22090)	-	4701602..4702579 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
R5028_RS22095 (R5028_22095)	-	4702589..4703146 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
R5028_RS22100 (R5028_22100)	dprA	4703187..4704275 (-)	1089	WP_023110564.1	DNA-processing protein DprA	Machinery gene
R5028_RS22105 (R5028_22105)	tsaP	4704410..4705435 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
R5028_RS22110 (R5028_22110)	def	4705574..4706080 (+)	507	WP_003107059.1	peptide deformylase	-
R5028_RS22115 (R5028_22115)	fmt	4706135..4707079 (+)	945	WP_023110565.1	methionyl-tRNA formyltransferase	-
R5028_RS22120 (R5028_22120)	rsmB	4707076..4708380 (+)	1305	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
R5028_RS22125 (R5028_22125)	trkA	4708408..4709781 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
R5028_RS22130 (R5028_22130)	-	4709930..4710247 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=820582 R5028_RS22105 WP_003097294.1 4704410..4705435(-) (tsaP) [Pseudomonas aeruginosa strain HPA2660]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=820582 R5028_RS22105 WP_003097294.1 4704410..4705435(-) (tsaP) [Pseudomonas aeruginosa strain HPA2660]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393