Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   R8566_RS01080 Genome accession   NZ_AP026920
Coordinates   192648..193088 (-) Length   146 a.a.
NCBI ID   WP_000861968.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700014     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 187648..198088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8566_RS01055 (PC0014_01950) - 187909..189195 (+) 1287 WP_000278859.1 response regulator transcription factor -
  R8566_RS01060 (PC0014_01960) - 189247..189780 (+) 534 WP_000729029.1 hypothetical protein -
  R8566_RS01065 (PC0014_01970) nrdI 189858..190328 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  R8566_RS01070 (PC0014_01980) - 190621..191883 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  R8566_RS01075 (PC0014_01990) - 192193..192651 (-) 459 WP_000745054.1 DUF3021 domain-containing protein -
  R8566_RS01080 (PC0014_02000) brsR 192648..193088 (-) 441 WP_000861968.1 LytTR family DNA-binding domain-containing protein Regulator
  R8566_RS01085 - 193176..193301 (-) 126 WP_001822433.1 hypothetical protein -
  R8566_RS01090 (PC0014_02010) - 193672..194538 (+) 867 WP_000537007.1 helix-turn-helix domain-containing protein -
  R8566_RS01095 (PC0014_02020) - 194688..194822 (+) 135 WP_001257106.1 hypothetical protein -
  R8566_RS01100 (PC0014_02040) - 195261..196691 (+) 1431 WP_001842470.1 lipopolysaccharide assembly protein LapB -
  R8566_RS01105 (PC0014_02050) - 196688..197863 (+) 1176 WP_000833229.1 MFS transporter -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17137.81 Da        Isoelectric Point: 5.9797

>NTDB_id=82036 R8566_RS01080 WP_000861968.1 192648..193088(-) (brsR) [Streptococcus pneumoniae strain PZ900700014]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=82036 R8566_RS01080 WP_000861968.1 192648..193088(-) (brsR) [Streptococcus pneumoniae strain PZ900700014]
ATGAAAGTAGAATTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
TCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.054

100

0.363