Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   R4701_RS07335 Genome accession   NZ_CP137114
Coordinates   1425035..1425994 (-) Length   319 a.a.
NCBI ID   WP_000777248.1    Uniprot ID   A0A0H2ZMI3
Organism   Streptococcus pneumoniae strain 15P3054     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1420035..1430994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4701_RS07310 yidD 1420104..1420346 (+) 243 WP_000821636.1 membrane protein insertion efficiency factor YidD -
  R4701_RS07315 - 1420720..1422066 (+) 1347 WP_001841633.1 IS1380-like element ISSpn5 family transposase -
  R4701_RS07320 - 1422279..1423244 (-) 966 WP_317805847.1 siderophore ABC transporter substrate-binding protein -
  R4701_RS07325 - 1423340..1424092 (-) 753 WP_000764306.1 ABC transporter ATP-binding protein -
  R4701_RS07330 - 1424089..1425045 (-) 957 WP_001193669.1 iron chelate uptake ABC transporter family permease subunit -
  R4701_RS07335 ceuB 1425035..1425994 (-) 960 WP_000777248.1 ABC transporter permease Machinery gene
  R4701_RS07340 - 1426291..1426401 (-) 111 WP_001108391.1 hypothetical protein -
  R4701_RS07345 - 1426658..1428004 (-) 1347 WP_001841633.1 IS1380-like element ISSpn5 family transposase -
  R4701_RS07350 - 1428170..1428826 (-) 657 Protein_1403 SDR family NAD(P)-dependent oxidoreductase -
  R4701_RS07355 pepA 1429227..1430291 (+) 1065 WP_000209199.1 glutamyl aminopeptidase -
  R4701_RS07360 - 1430313..1430609 (+) 297 WP_000840135.1 bacteriocin immunity protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35418.29 Da        Isoelectric Point: 9.7465

>NTDB_id=820147 R4701_RS07335 WP_000777248.1 1425035..1425994(-) (ceuB) [Streptococcus pneumoniae strain 15P3054]
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Nucleotide


Download         Length: 960 bp        

>NTDB_id=820147 R4701_RS07335 WP_000777248.1 1425035..1425994(-) (ceuB) [Streptococcus pneumoniae strain 15P3054]
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCTTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(10-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZMI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

37.419

97.179

0.364