Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R4707_RS08630 Genome accession   NZ_CP137113
Coordinates   1632605..1632871 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain ZGX     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1627605..1637871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4707_RS08610 - 1627860..1628369 (+) 510 WP_000619939.1 N-acetyltransferase -
  R4707_RS08615 pheT 1628446..1630851 (+) 2406 WP_050104266.1 phenylalanine--tRNA ligase subunit beta -
  R4707_RS08620 - 1630919..1631920 (-) 1002 WP_050104269.1 endonuclease/exonuclease/phosphatase family protein -
  R4707_RS08625 - 1632076..1632479 (+) 404 Protein_1654 helix-turn-helix domain-containing protein -
  R4707_RS08630 HI0659 1632605..1632871 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  R4707_RS08635 metE 1633132..1635381 (+) 2250 WP_000108198.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R4707_RS08640 metF 1635445..1636311 (+) 867 WP_000089990.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  R4707_RS11440 - 1636493..1636762 (-) 270 WP_078135719.1 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=820032 R4707_RS08630 WP_001808618.1 1632605..1632871(+) (HI0659) [Streptococcus pneumoniae strain ZGX]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=820032 R4707_RS08630 WP_001808618.1 1632605..1632871(+) (HI0659) [Streptococcus pneumoniae strain ZGX]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534