Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   R4707_RS00270 Genome accession   NZ_CP137113
Coordinates   51424..51888 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus pneumoniae strain ZGX     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 46424..56888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4707_RS00250 - 47375..48343 (-) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  R4707_RS00255 pdrM 48497..49858 (-) 1362 WP_081542902.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  R4707_RS00260 - 49869..50129 (-) 261 WP_001105925.1 hypothetical protein -
  R4707_RS00265 - 50143..51411 (-) 1269 WP_000924492.1 dihydroorotase -
  R4707_RS00270 mutX 51424..51888 (-) 465 WP_001135768.1 8-oxo-dGTP diphosphatase Machinery gene
  R4707_RS00275 - 51898..52551 (-) 654 WP_000401328.1 uracil-DNA glycosylase -
  R4707_RS00280 - 52689..53336 (-) 648 WP_081542900.1 hypothetical protein -
  R4707_RS00285 - 53350..54063 (-) 714 WP_000499437.1 YjjG family noncanonical pyrimidine nucleotidase -
  R4707_RS00290 dhaM 54522..54902 (-) 381 WP_000443784.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  R4707_RS00295 - 54902..54976 (-) 75 Protein_58 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=819934 R4707_RS00270 WP_001135768.1 51424..51888(-) (mutX) [Streptococcus pneumoniae strain ZGX]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=819934 R4707_RS00270 WP_001135768.1 51424..51888(-) (mutX) [Streptococcus pneumoniae strain ZGX]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCTAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987