NTDB

Overview

Name	ceuB	Type	Machinery gene
Locus tag	R4712_RS07375	Genome accession	NZ_CP137110
Coordinates	1430784..1431743 (-)	Length	319 a.a.
NCBI ID	WP_000777248.1	Uniprot ID	A0A0H2ZMI3
Organism	Streptococcus pneumoniae strain 16H2041
Function	DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1425784..1436743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4712_RS07345	scpB	1426283..1426852 (+)	570	WP_000105310.1	SMC-Scp complex subunit ScpB	-
R4712_RS07350	-	1426839..1427561 (+)	723	WP_001222228.1	pseudouridine synthase	-
R4712_RS07355	yidD	1427561..1427803 (+)	243	WP_000821616.1	membrane protein insertion efficiency factor YidD	-
R4712_RS07360	-	1428028..1428993 (-)	966	WP_000858268.1	siderophore ABC transporter substrate-binding protein	-
R4712_RS07365	-	1429089..1429841 (-)	753	WP_000764312.1	ABC transporter ATP-binding protein	-
R4712_RS07370	-	1429838..1430794 (-)	957	WP_001193669.1	iron chelate uptake ABC transporter family permease subunit	-
R4712_RS07375	ceuB	1430784..1431743 (-)	960	WP_000777248.1	ABC transporter permease	Machinery gene
R4712_RS07380	-	1432040..1432150 (-)	111	WP_001108391.1	hypothetical protein	-
R4712_RS07385	galE	1432166..1432867 (-)	702	WP_000167837.1	UDP-glucose 4-epimerase GalE	-
R4712_RS07390	pepA	1433268..1434332 (+)	1065	WP_000209199.1	glutamyl aminopeptidase	-
R4712_RS07395	-	1434354..1434650 (+)	297	WP_000230151.1	bacteriocin immunity protein	-
R4712_RS07400	-	1435332..1435775 (+)	444	WP_000655202.1	MarR family winged helix-turn-helix transcriptional regulator	-
R4712_RS07405	-	1435779..1436543 (+)	765	WP_044812634.1	nuclear transport factor 2 family protein	-

Sequence

Protein

Download Length: 319 a.a. Molecular weight: 35418.29 Da Isoelectric Point: 9.7465

                                >NTDB_id=819666 R4712_RS07375 WP_000777248.1 1430784..1431743(-) (ceuB) [Streptococcus pneumoniae strain 16H2041]

MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST

VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL

VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG

GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Nucleotide

Download Length: 960 bp

                                >NTDB_id=819666 R4712_RS07375 WP_000777248.1 1430784..1431743(-) (ceuB) [Streptococcus pneumoniae strain 16H2041]

ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC

ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC

TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA

GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTCTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT

GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT

GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG

GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT

CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTGGGGAAAGAAACCAGCGAGAGTTTGG

GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT

GGCTTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT

GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG

TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(10-312)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZMI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	37.419	97.179	0.364

Detailed information NTG0819666