Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R4715_RS02460 Genome accession   NZ_CP137108
Coordinates   514314..514580 (-) Length   88 a.a.
NCBI ID   WP_001814186.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain OXT     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 509314..519580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4715_RS02450 metF 510874..511740 (-) 867 WP_001277841.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  R4715_RS02455 metE 511804..514053 (-) 2250 WP_000108216.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R4715_RS02460 HI0659 514314..514580 (-) 267 WP_001814186.1 helix-turn-helix domain-containing protein Machinery gene
  R4715_RS02465 - 514706..515109 (-) 404 Protein_491 helix-turn-helix domain-containing protein -
  R4715_RS02470 - 515256..516257 (+) 1002 WP_000597984.1 endonuclease/exonuclease/phosphatase family protein -
  R4715_RS02475 pheT 516325..518730 (-) 2406 WP_000961570.1 phenylalanine--tRNA ligase subunit beta -
  R4715_RS02480 - 518807..519316 (-) 510 WP_000619939.1 N-acetyltransferase -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9641.11 Da        Isoelectric Point: 4.2720

>NTDB_id=819362 R4715_RS02460 WP_001814186.1 514314..514580(-) (HI0659) [Streptococcus pneumoniae strain OXT]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=819362 R4715_RS02460 WP_001814186.1 514314..514580(-) (HI0659) [Streptococcus pneumoniae strain OXT]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

55.844

87.5

0.489