Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R4711_RS02705 Genome accession   NZ_CP137107
Coordinates   542503..542769 (-) Length   88 a.a.
NCBI ID   WP_001811621.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 15H4024     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 537503..547769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4711_RS02695 metF 539064..539930 (-) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  R4711_RS02700 metE 539994..542243 (-) 2250 WP_000108270.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R4711_RS02705 HI0659 542503..542769 (-) 267 WP_001811621.1 helix-turn-helix domain-containing protein Machinery gene
  R4711_RS02710 - 542854..543342 (-) 489 Protein_539 transposase -
  R4711_RS02715 - 543498..544499 (+) 1002 WP_050263759.1 endonuclease/exonuclease/phosphatase family protein -
  R4711_RS02720 pheT 544567..546972 (-) 2406 WP_050263761.1 phenylalanine--tRNA ligase subunit beta -
  R4711_RS02725 - 547049..547558 (-) 510 WP_000619941.1 N-acetyltransferase -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9560.13 Da        Isoelectric Point: 4.8274

>NTDB_id=819243 R4711_RS02705 WP_001811621.1 542503..542769(-) (HI0659) [Streptococcus pneumoniae strain 15H4024]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=819243 R4711_RS02705 WP_001811621.1 542503..542769(-) (HI0659) [Streptococcus pneumoniae strain 15H4024]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534