Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QAO33_RS12895 Genome accession   NZ_CP123123
Coordinates   2643322..2644365 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain GE-MSSA33     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2638322..2649365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO33_RS12865 (QAO33_12860) - 2638740..2639996 (-) 1257 WP_001789555.1 aminopeptidase -
  QAO33_RS12870 (QAO33_12865) - 2639999..2640199 (-) 201 WP_000180460.1 DUF1128 family protein -
  QAO33_RS12875 (QAO33_12870) - 2640346..2640810 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  QAO33_RS12880 (QAO33_12875) - 2640817..2641092 (+) 276 WP_000428171.1 hypothetical protein -
  QAO33_RS12885 (QAO33_12880) - 2641370..2642587 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  QAO33_RS12890 (QAO33_12885) vraR 2642703..2643332 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  QAO33_RS12895 (QAO33_12890) vraS 2643322..2644365 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  QAO33_RS12900 (QAO33_12895) liaF 2644362..2645063 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  QAO33_RS12905 (QAO33_12900) - 2645078..2645464 (-) 387 WP_001110179.1 hypothetical protein -
  QAO33_RS12910 (QAO33_12905) map 2645681..2646439 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  QAO33_RS12915 (QAO33_12910) - 2646970..2647956 (+) 987 WP_000999716.1 FUSC family protein -
  QAO33_RS12920 (QAO33_12915) - 2648387..2648800 (-) 414 WP_001670387.1 hypothetical protein -
  QAO33_RS12925 (QAO33_12920) - 2648829..2648939 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=819129 QAO33_RS12895 WP_001017131.1 2643322..2644365(-) (vraS) [Staphylococcus aureus strain GE-MSSA33]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=819129 QAO33_RS12895 WP_001017131.1 2643322..2644365(-) (vraS) [Staphylococcus aureus strain GE-MSSA33]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAGTTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1