Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QAO48_RS02210 Genome accession   NZ_CP123119
Coordinates   404682..405368 (+) Length   228 a.a.
NCBI ID   WP_075583650.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MSSA41     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 399682..410368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO48_RS02175 (QAO48_02165) yqeH 400209..401309 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  QAO48_RS02180 (QAO48_02170) aroE 401323..402129 (+) 807 WP_000666749.1 shikimate dehydrogenase -
  QAO48_RS02185 (QAO48_02175) yhbY 402133..402423 (+) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  QAO48_RS02190 (QAO48_02180) nadD 402426..402995 (+) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QAO48_RS02195 (QAO48_02185) yqeK 402985..403569 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QAO48_RS02200 (QAO48_02190) rsfS 403570..403923 (+) 354 WP_001088022.1 ribosome silencing factor -
  QAO48_RS02205 (QAO48_02195) - 403926..404642 (+) 717 WP_000084831.1 class I SAM-dependent DNA methyltransferase -
  QAO48_RS02210 (QAO48_02200) comEA 404682..405368 (+) 687 WP_075583650.1 ComEA family DNA-binding protein Machinery gene
  QAO48_RS02215 (QAO48_02205) - 405460..405921 (+) 462 WP_000439693.1 ComE operon protein 2 -
  QAO48_RS02220 (QAO48_02210) - 405926..408126 (+) 2201 Protein_403 DNA internalization-related competence protein ComEC/Rec2 -
  QAO48_RS02225 (QAO48_02215) holA 408183..409157 (+) 975 WP_001282562.1 DNA polymerase III subunit delta -
  QAO48_RS02230 (QAO48_02220) rpsT 409202..409453 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25787.53 Da        Isoelectric Point: 9.6753

>NTDB_id=819015 QAO48_RS02210 WP_075583650.1 404682..405368(+) (comEA) [Staphylococcus aureus strain GE-MSSA41]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=819015 QAO48_RS02210 WP_075583650.1 404682..405368(+) (comEA) [Staphylococcus aureus strain GE-MSSA41]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.123

100

0.991
  comEA Staphylococcus aureus N315

98.246

100

0.982