NTDB

Overview

Name	ceuB	Type	Machinery gene
Locus tag	R4710_RS03530	Genome accession	NZ_CP137101
Coordinates	681401..682360 (+)	Length	319 a.a.
NCBI ID	WP_000777248.1	Uniprot ID	A0A0H2ZMI3
Organism	Streptococcus pneumoniae strain 16P2012-2
Function	DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 676401..687360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4710_RS03500	-	676601..677365 (-)	765	WP_000082880.1	nuclear transport factor 2 family protein	-
R4710_RS03505	-	677369..677812 (-)	444	WP_000655200.1	MarR family winged helix-turn-helix transcriptional regulator	-
R4710_RS03510	-	678494..678790 (-)	297	WP_000230153.1	bacteriocin immunity protein	-
R4710_RS03515	pepA	678812..679876 (-)	1065	WP_000209199.1	glutamyl aminopeptidase	-
R4710_RS03520	galE	680277..680978 (+)	702	WP_061370568.1	UDP-glucose 4-epimerase GalE	-
R4710_RS03525	-	680994..681104 (+)	111	WP_001108391.1	hypothetical protein	-
R4710_RS03530	ceuB	681401..682360 (+)	960	WP_000777248.1	ABC transporter permease	Machinery gene
R4710_RS03535	-	682350..683306 (+)	957	WP_001193669.1	iron chelate uptake ABC transporter family permease subunit	-
R4710_RS03540	-	683303..684055 (+)	753	WP_044811513.1	ABC transporter ATP-binding protein	-
R4710_RS03545	-	684151..685116 (+)	966	WP_050199579.1	siderophore ABC transporter substrate-binding protein	-
R4710_RS03550	yidD	685341..685583 (-)	243	WP_000821640.1	membrane protein insertion efficiency factor YidD	-
R4710_RS03555	-	685583..686305 (-)	723	WP_001222228.1	pseudouridine synthase	-
R4710_RS03560	scpB	686292..686861 (-)	570	WP_000105310.1	SMC-Scp complex subunit ScpB	-

Sequence

Protein

Download Length: 319 a.a. Molecular weight: 35418.29 Da Isoelectric Point: 9.7465

                                >NTDB_id=818536 R4710_RS03530 WP_000777248.1 681401..682360(+) (ceuB) [Streptococcus pneumoniae strain 16P2012-2]

MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST

VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL

VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG

GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Nucleotide

Download Length: 960 bp

                                >NTDB_id=818536 R4710_RS03530 WP_000777248.1 681401..682360(+) (ceuB) [Streptococcus pneumoniae strain 16P2012-2]

ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC

ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC

TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA

GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTCTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT

GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT

GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG

GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT

CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTGGGGAAAGAAACCAGCGAGAGTTTGG

GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT

GGCTTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT

GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG

TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(10-312)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZMI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	37.419	97.179	0.364

Detailed information NTG0818536