Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   QEP67_RS21875 Genome accession   NZ_CP123058
Coordinates   4215210..4217036 (-) Length   608 a.a.
NCBI ID   WP_000003404.1    Uniprot ID   A0A1G6YA02
Organism   Bacillus cereus group sp. MS39     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 4210210..4222036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP67_RS21840 (QEP67_21765) - 4210624..4211421 (-) 798 WP_000673190.1 NAD kinase -
  QEP67_RS21845 (QEP67_21770) - 4211440..4212078 (-) 639 WP_001081480.1 GTP pyrophosphokinase family protein -
  QEP67_RS21850 (QEP67_21775) - 4212109..4212480 (-) 372 WP_001179998.1 hypothetical protein -
  QEP67_RS21855 (QEP67_21780) - 4212627..4213205 (+) 579 WP_000191103.1 CYTH domain-containing protein -
  QEP67_RS21860 (QEP67_21785) - 4213386..4213784 (+) 399 WP_000043382.1 hypothetical protein -
  QEP67_RS21865 (QEP67_21790) - 4213784..4214677 (+) 894 WP_000360672.1 ClpXP adapter SpxH family protein -
  QEP67_RS21870 (QEP67_21795) - 4214908..4215099 (+) 192 WP_002108703.1 hypothetical protein -
  QEP67_RS21875 (QEP67_21800) pepF 4215210..4217036 (-) 1827 WP_000003404.1 oligoendopeptidase F Regulator
  QEP67_RS21880 (QEP67_21805) - 4217087..4218331 (-) 1245 WP_048567030.1 competence protein CoiA family protein -
  QEP67_RS21885 (QEP67_21810) - 4218412..4219956 (-) 1545 WP_000799209.1 cardiolipin synthase -
  QEP67_RS21890 (QEP67_21815) mecA 4220029..4220712 (-) 684 WP_000350721.1 adaptor protein MecA Regulator
  QEP67_RS21895 (QEP67_21820) - 4221055..4221729 (+) 675 WP_000362605.1 TerC family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70184.35 Da        Isoelectric Point: 4.5888

>NTDB_id=818049 QEP67_RS21875 WP_000003404.1 4215210..4217036(-) (pepF) [Bacillus cereus group sp. MS39]
MSEQNTTKTLPNRSEIEESNTWRLEDIFQTDAEWEKEFQAIKGLLPKLTEFKGKLGDSADNLLEALQYEDEISMRLGKLY
TYAHMRYDQDTTNSVYQALNDRATNLYSQVSSSTAYIVPEILSIAEDTLQTFLTENRDLSVYEHALEEITRQRPHVLSEA
EEALLAEASEVMSASSNTFGMLNNADLKFPSIKGEDGEEVEITHGRYIQFLESDDRRVREDAFKAVYETYGKYKNTFAST
LSGAVKRNNFNARVRKYDSARQAALSNNNIPEAVYDQLVESVNDNLHLLHRYIDIRKRALGLDELHMYDLYTPLVPEVKM
NVKYEEAQDMLLKSLNVLGDEYVDILKEAYENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWHDNVNNLYTLAHEFGHS
VHSYYTRKTQPHVYGDYSIFVAEVASTCNEALLNDYLLKTTEDKKERLYLLNHYLEGFRGTVFRQTMFAEFEHIIHKKVQ
EGHAVTPDMLTEIYYDLNKKYFGDALVIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYINEF
LKAGSSDYPIEVLKKAGVDMASPEPVKEALQVFEEKLNELEALLFEEN

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=818049 QEP67_RS21875 WP_000003404.1 4215210..4217036(-) (pepF) [Bacillus cereus group sp. MS39]
ATGTCTGAACAAAACACAACAAAAACATTACCAAATCGCAGTGAGATTGAAGAATCAAACACATGGCGATTAGAAGATAT
TTTCCAAACAGATGCAGAATGGGAAAAAGAATTCCAAGCTATTAAAGGGCTATTACCGAAGTTAACTGAATTTAAAGGGA
AACTTGGTGACTCTGCGGACAATTTGCTTGAGGCATTGCAATATGAAGACGAAATTTCAATGCGATTAGGTAAGCTATAT
ACATATGCACATATGCGTTACGATCAAGATACAACAAACTCTGTGTATCAAGCGTTAAATGACCGCGCAACAAATTTATA
TTCACAAGTATCTAGTAGCACAGCATATATTGTGCCTGAAATTTTATCGATTGCAGAAGATACACTGCAAACATTCTTGA
CAGAAAATAGAGACTTAAGTGTATATGAACATGCATTAGAAGAAATTACGCGTCAACGCCCGCACGTATTATCTGAAGCG
GAAGAGGCTCTATTAGCAGAAGCATCTGAAGTAATGAGTGCGTCAAGTAATACATTTGGTATGTTGAATAATGCGGATTT
GAAATTCCCATCTATTAAAGGTGAGGATGGAGAAGAAGTGGAAATTACACATGGTCGTTACATTCAGTTTTTAGAAAGTG
ATGATCGTCGTGTGCGCGAAGATGCATTCAAAGCTGTATATGAAACGTACGGGAAATATAAGAACACATTTGCAAGCACG
TTAAGCGGAGCTGTGAAACGTAATAATTTCAATGCGCGTGTTCGTAAATACGATTCTGCACGTCAAGCGGCATTAAGTAA
TAATAATATTCCTGAAGCGGTGTATGATCAACTTGTTGAATCTGTAAATGATAATTTACACTTGCTACATCGTTACATTG
ATATTCGTAAGCGTGCACTAGGACTTGATGAGCTTCATATGTATGATTTATATACACCACTTGTACCAGAAGTGAAAATG
AACGTGAAGTATGAAGAAGCACAAGACATGTTATTAAAGTCTTTAAACGTACTTGGTGATGAGTATGTTGACATTTTAAA
AGAAGCATATGAAAATCGCTGGGTAGATGTGTATGAGAATAAAGGAAAGCGAAGCGGAGCATATTCATCTGGTGCCTATG
GAACAAATCCGTATATTTTAATGAACTGGCATGATAATGTAAATAATTTATATACACTTGCTCATGAGTTCGGTCATTCC
GTGCATAGTTACTATACAAGAAAGACGCAGCCGCACGTATACGGTGATTATTCAATCTTCGTTGCGGAAGTAGCATCAAC
TTGTAATGAAGCACTTCTAAACGATTATTTATTAAAAACGACAGAAGATAAGAAAGAGCGTCTATACTTATTAAATCATT
ATTTAGAAGGATTCCGTGGTACTGTATTCCGTCAAACGATGTTCGCAGAGTTTGAGCATATTATTCATAAGAAAGTACAA
GAAGGACATGCGGTTACGCCAGACATGTTAACGGAGATCTACTATGATTTAAATAAGAAATATTTCGGTGATGCTTTAGT
AATCGATGAAGAAATTGGTTTAGAGTGGTCTCGTATTCCGCACTTCTACTACAACTATTACGTATACCAATACGCAACAG
GATTTAGTGCAGCAACGGCTTTATCTAAACAAATTTTAGAAGAGGGGCAACCAGCAGTAGAACGTTACATTAATGAGTTC
TTAAAAGCAGGAAGCTCAGATTATCCAATTGAAGTGCTGAAAAAAGCTGGAGTAGATATGGCATCTCCAGAACCGGTAAA
AGAAGCGCTACAAGTATTTGAAGAGAAATTAAATGAATTAGAAGCACTATTATTTGAAGAGAATTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-591)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G6YA02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.253

97.533

0.49